Search Results for "database tool"

PubChemSR is an MS-Windows-based data search and retrieval tool for the NCBI's public chemical database PubChem. PubChemSR makes it especially straightforward for researchers to utilize the chemical, biological and screening data available in PubChem. The latest version is v3.6.5 (released on 11/07/2020), which is fully compatible with the current PubChem web interface.

Note: This version requires additional SQLite database files. Contact the developers to obtain them. Use http://www.integrativegenomics.org/ for the latest data and analyses. GenomeRunner is a tool for automating genome exploration. It performs annotation and enrichment analyses of user-provided genomic regions (SNPs, ChIP-seq binding sites etc.) against >6,000 (human genome) epigenomic features available from the UCSC genome browser.

Random-sequence peptide libraries are a commonly used tool to identify novel ligands for binding antibodies, other proteins, and small molecules. It is often of interest to compare the selected peptide sequences to the natural protein binding partners to infer the exact binding site or the importance of particular residues. GuiTope provides a convenient method for comparing selected peptide sequences to protein sequences, including flexible alignment parameters, novel alignment features, ability to search a database, and statistical significance of results. ...