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  • 1
    SpecProc2Browser

    SpecProc2Browser

    Default Browser Support for SpecProc

    ...This is a companion app for SpecProc (https://sourceforge.net/projects/specproc/) When configured it quietly runs at the end of each batch and opens your results files in your default web browser. Sadly there is a little bit more to it than that. You have to configure a web server on your PC, but that isn't as difficult as it sounds and there are instructions in the Wiki.
    Downloads: 0 This Week
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  • 2
    GenomeRunner

    GenomeRunner

    Annotation and enrichment of Next-Gen sequencing data

    ...It performs annotation and enrichment analyses of user-provided genomic regions (SNPs, ChIP-seq binding sites etc.) against >6,000 (human genome) epigenomic features available from the UCSC genome browser. Input - any genome-wide data data in .bed format (tab-delimited text file with chrom, chromStart, chromEnd). Annotation analysis output - detailed annotation of each genomic region in input data. Used to prioritize individual genomic regions by the total number of epigenomic features they co-localize with. Enrichment analysis output - p-values of statistically significant co-localizations of input genome-wide data with genome annotation features selected for the analysis. ...
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    Downloads: 0 This Week
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  • 3
    A testing and proof of concept tool for querying multiple Internet data sources (primarily RDF) using various TDWG endorsed protocols.
    Downloads: 0 This Week
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