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We describe a simple XML format to share text documents and annotation
A minimalist approach to share text documents and data annotations. Allows a large number of different annotations to be represented.
Project files contain:
- simple code to hold/read/write data and perform sample processing.
- BioC-formatted corpora
- BioC tools that work with BioC corpora
BioC goals
- simplicity
- interoperability
- broad use
- reuse
There should be little investment required to learn to use a format or a software module to process that format. We are...
mx is a Ruby/Rails code base with broad application in evolutionary biology, it includes general functionality for matrix handling, sequence management, ontology construction, specimen handling, taxonomic catalogs, taxonomic descriptions and more
Network Visualization is a mature part of computer science that is enjoying a good deal of growth, partially fueled by Bioinformatics. Network is a synonym for Graph, and both refer to a collection of nodes and edges.