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...It simplifies the analysis of macromolecular structures, protein complexes, and molecular dynamics trajectories and offers a platform for the rapid integration of external programs.
PLEASE NOTE: The Biskit source code as well as any later releases are now hosted on https://github.com/graik/biskit
The sourceforge repo is only kept here for reference.
Analysing high-throughput sequencing data with Python
This SourceForge page is outdated!
HTSeq has been moved to github: https://github.com/simon-anders/htseq
General information and documentation on HTSeq; http://www-huber.embl.de/users/anders/HTSeq
XMIPP is an image processing suite for 3D-reconstruction of biological specimens from transmission electron microscopy data. NOTE that stable releases (including binaries) are longer stored at Sourceforge, but are available at http://xmipp.cnb.csic.es
XMIPP is an image processing suite for 3D-reconstruction of biological specimens from transmission electron microscopy data. NOTE that stable releases (including binaries) are longer stored at Sourceforge, but are available at http://xmipp.cnb.csic.es
...Defaults ensure ease of use for typical scenarios while allowing great flexibility when needed. Access is via a free web service at http://hazeslab.med.ualberta.ca/CDSbank/. SourceForge code can be used to build a local installation.
A repository of Python extension scripts for use with the Sparky (http://www.cgl.ucsf.edu/home/sparky) NMR assignment package. No packaged releases yet, but there are scripts in the Sourceforge CVS@ http://sparkyscripts.cvs.sourceforge.net/sparkyscripts