Showing 4 open source projects for "life"

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  • 1
    Evo 2

    Evo 2

    Genome modeling and design across all domains of life

    Evo 2 is a DNA language model system designed for long-context genome modeling and biological sequence design across all domains of life. The project models DNA at single-nucleotide resolution and supports context windows of up to one million base pairs, which places it in a class of models built for very large genomic reasoning tasks. According to the repository, it uses the StripedHyena 2 architecture, was pretrained with Savanna, and was trained autoregressively on the OpenGenome2 dataset containing 8.8 trillion tokens. ...
    Downloads: 0 This Week
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  • 2

    CSST

    Cascade and Sharing Survival Trees, an ensemble for survival analysis

    ...It is a strightforward extension of the CS4 method for lifetime collections of data. The CSST software comes along with its companion the CSST Prediction tool, to use the ensemble prediction in everyday life. Please, refer to the user's manual for further information.
    Downloads: 0 This Week
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  • 3
    EUtils is a python client-side library for querying the NCBI's Entrez life science databases through the NCBI eUtils web services.
    Downloads: 0 This Week
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  • 4
    A colorized interactive dotplot program designed for pair-wise comparisons of RNA & DNA. The original idea was from the mind of late Prof. William J. Dreyer of Caltech. The idea is to be able to see the "tapestry" of life, which comes alive with color.
    Downloads: 0 This Week
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