Showing 91 open source projects for "python 3"

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  • 1
    Febrl (Freely Extensible Biomedical Record Linkage) does data standardisation (segmentation and cleaning) and probabilistic record linkage ("fuzzy" matching) of one or more files or data sources which do not share a unique record key or identifier.
    Downloads: 0 This Week
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  • 2

    Clinical Evidence Detector

    Detector of clinical evidence

    This is a Python program based on the NegEx algorithm that detects the polarity of the clinical evidence in clinical random trials. If you use this code please cite this paper: P. Davis-Desmond and Diego Mollá. Detection of Evidence in Clinical Research Papers (2012). Australasian Workshop On Health Informatics and Knowledge Management (HIKM 2012), Melbourne, Australia. http://www.ics.mq.edu.au/~diego/publications/hikm12.pdf
    Downloads: 0 This Week
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  • 3
    This repository is outdated. Please visit https://github.com/RegulatoryGenomicsUPF/pyicoteo/tags
    Downloads: 0 This Week
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  • 4
    Object oriented reusable software classes designed to be used to construct larger software projects developed in multiple software languages.
    Downloads: 0 This Week
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  • 5
    fqms is a software tool for Lable-free Quantification of Proteins by LCMSE.
    Downloads: 0 This Week
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  • 6
    Volumetric file viewer for the human brain. Easy, powerful and flexible fMRI/MRI brain research and clinical neuro-surgery tool. Using state of the art open VTK 3D library, the proven Qt GUI toolkit, coded in Python.
    Downloads: 0 This Week
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  • 7
    A database and a web front end for physiologic data on animal feeding, developed with PostgreSQL and Django at NESCent (http://www.nescent.org) for Mammalian Feeding Working Group (http://www.feedexp.org). Current development of the codebase is on Github at http://github.com/NESCent/feedingdb.
    Downloads: 0 This Week
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  • 8
    FONZIE
    FONZIE is a bioinformatic tool written in Python developed for the genetic cartography speciality. FONZIE allow as well to find markers on a set of sequences than to find associate oligonucleotides. http://www.biomedcentral.com/1756-0500/3/322/abstra
    Downloads: 0 This Week
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  • 9
    A set of bioinformatics tools for the open source bio-informatics platform "birch"
    Downloads: 0 This Week
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  • 10
    A python/C++ framework for Bayesian phylogenetic analysis.
    Downloads: 0 This Week
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  • 11
    A univariate and multivariate analysis UI. This project is no longer under development. Please use as you wish.
    Downloads: 3 This Week
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  • 12
    A web-based system for upoading, managing, sharing, and analyzing bioinformatic data. The system is primarily written in python, and runs on both linux and MacOs.
    Downloads: 0 This Week
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  • 13
    A GUI-based search tool that allows the exploration of the relationships between Metabolites.
    Downloads: 0 This Week
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  • 14
    A small simulator for Mendelian genetics, genetic drift, natural selection and random mutations, built on matplotlib and wxpython. A graph will be generated that traces the distribution of genotypes at successive generations.
    Downloads: 0 This Week
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  • 15
    A Python library bringing together utilities I've written over the years for work in bioinformatics and biostatistics, which should be generally applicable outside these fields as well. Focuses on string processing, DBI, and math.
    Downloads: 0 This Week
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  • 16
    An open source implementation of a protein threading program based on the energy functions and techniques originally introduced by Prospect.
    Downloads: 0 This Week
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  • 17
    A web-based repository of plasmids and biobricks (see http://parts.mit.edu) plus related utility programs that support synthetic biology research. Note: This project is not updated any longer. A completely re-written and much better version of this web server can be found here: http://www.rotmic.org
    Downloads: 0 This Week
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  • 18
    pyTray is protein crystallization management software. It allows the user to design screens, helps in setting up, and manages the results obtained form the screen.
    Downloads: 0 This Week
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  • 19
    This program has been written having in mind to create an useful tool to evaluate the Motor Evoked Potentials (MEPs) generated by Transcranial Magnetic Stimulation (TMS) and recorded with the program "Signal" (version 2.xx).
    Downloads: 0 This Week
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  • 20
    Graphical interface for ModelTest and MrModelTest written in Python, for Windows, Linux and Mac OSX
    Downloads: 0 This Week
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  • 21
    This project is A Mitochondrial OxydoReduction Simulation System. It consists of two linked projects: a program for displaying and analysing large biomolecular systems (Floral) and a multi-agent simulator for biomolecular oxydoreduction systems (AMORSS).
    Downloads: 0 This Week
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  • 22
    PARs is a bioinformatics tool for the analysis of cis-regulatory DNA sequences. Composed of two parts: a suite of sequence analysis algorithms for predicting cis-binding sites in DNA sequences and a GUI for visualisation and exploration of the results.
    Downloads: 0 This Week
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  • 23
    DrPangloss is a python implementation of a three operator genetic algorithm, complete with a java swing GUI for running the GA and visualising performance, generation by generation
    Downloads: 0 This Week
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  • 24
    Random Genome Sequence Downloader.
    Downloads: 0 This Week
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  • 25
    Genetic programming environment to inference context free grammars base on positive and negative examples of language.
    Downloads: 0 This Week
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