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Showing 5 open source projects for "trace"

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    Pipebar

    A fast and accurate pipeline for DNA barcoding analysis.

    ...Here we proposed a pipeline for DNA chromatograms analysis of Sanger platform by open-source tools integration in order to reduce cost with standard commercial licences ensuring high quality, robustness with reduced time. Pipebar is a python application created to automatization of processing chromatogram trace files to high-quality DNA sequences for downstream analyses.
    Downloads: 0 This Week
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  • 2
    This project houses software to analyze data acquired from electrophysiology experiments. Currently, we have an Octave/MATLAB program to analyze electroneurogram traces of coupled oscillators, and a Perl library for the analysis of voltage trace data
    Downloads: 0 This Week
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  • 3
    bni-tools
    --UPDATE-- New Version is now integrated in the official PyMOL plugin repository! --UPDATE-- The BNI (Beyond Normal Interaction)- Tools is a plug in for the PyMOL molecular visualization system which adds additional functionalities and presets to the PyMOL GUI and also adds useful extended commands.
    Downloads: 0 This Week
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  • 4
    SeqTRACS is a Laboratory Information Management System for tracking, organizing, and accessing sequencing requests and ABI trace files produced by a centralized sequencing core facility. Trace files are tracked in a database and can be retrieved by users
    Downloads: 1 This Week
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  • 5
    POSA (Perl Objects for Sequence Analysis) provides an easy-to-use perl interface to handling raw ABI sequence trace files. For example: fasta can be extracted, sequence contigs can be build and putative SNPs and SBE primers can be easily generated.
    Downloads: 0 This Week
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