Showing 7 open source projects for "graph tool"

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    PanOCT

    Pan-genome Ortholog Clustering Tool

    PanOCT, Pan-genome Ortholog Clustering Tool, is a program written in PERL for pan-genomic analysis of closely related prokaryotic species or strains. Unlike traditional graph-based ortholog detection programs, it uses micro synteny or conserved gene neighborhood (CGN) in addition to homology to accurately place proteins into orthologous clusters.
    Downloads: 1 This Week
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  • 2
    Biogranat (Molecular Biology Graph Visualisation and Analysis Tool) is a new tool for the analysis and visualisation of large datasets.
    Downloads: 0 This Week
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  • 3
    CIG-P

    CIG-P

    CIG-P is a simple yet flexible data visualization tool

    ...Publication: CIG-P: Cicular Interaction Graph for Proteomics http://www.biomedcentral.com/1471-2105/15/344/ Previously known as PIVOT (Protein Interaction Visualization and Observation Tool)
    Downloads: 11 This Week
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  • 4
    BINViz(Bidirectional Interactive Network Visualization) is a JavaScript library for network and graph visualization. The goal of this tool is to provide a better way to visualize complex graphical models and the underlying data in a web-based environ
    Downloads: 0 This Week
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  • 5
    Narrator is a graphical modelling tool for the description of dynamical systems and processes. Narrator is SBML compatible.
    Downloads: 0 This Week
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  • 6
    hmm2gviz is a tool used for converting hidden Markov models generated by HMMER into a graph visualization using Graphviz.
    Downloads: 0 This Week
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  • 7
    Python library to convert networks from/to many different formats, like the ones used in Pajek, Cytoscape and other popular graph formats like GML. It also includes support to integrate experimental data to the netowork.
    Downloads: 0 This Week
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