Search Results for "gnu linux" - Page 62
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Showing 1554 open source projects for "gnu linux"
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PNE provides an environment for modeling, simulating, and optimizing biological networks including regulatory and metabolic networks.
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SB:M/O is a cross-platform toolbox for systems biology. It fully supports both Matlab and the open source alternative, Octave. The aim is to make it easy for the systems biology community to develop new, portable systems biology solutions.
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Project provides some Tcl/Tk procedure for manipulating Biology data. And, attributed to the clarity of the Tcl code, it is also useful for education.
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Python program devoted to study the relationship between cells during inmune response. It is based on a 3D periodic boundary conditions grid where cells see each other and react according to certain movement, growth and interaction rules.
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It is a Cross Language Interface Platform that allows different languages to call and execute functions of other languages using xml-rpc as the remote procedure call vehicle.
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CTM, an acronym for Closure Task Manager, is a generic Web based project management system used to manage tasks and the project team for one or more genome finishing (Closure) projects.
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The aim of postubuntu is to simplify and accelerate Ubuntu 8.04 post installation by installing automatically software chosen by tasks and proprietary software like googleearth, flashplayer or acrobat reader. It can also add NIS/NFS configuration.
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CC8Works is a Web-based software system for managing and documenting a cross of eight existing inbred mouse lines to yield hundreds to thousands of recombinant inbred lines that will become a permanent genetic resource for biomedical research.
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Ducking is a software who is providing simulation of probable docking between two proteins using rigid body monte carlo method. It is written in python and uses the libraries wxPython, VTK, SciPy and BioPython.
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biojazz
In silico evolution of biochemical networks.
In silico evolution of biochemical networks using a genetic algorithm combined with a rule-based biochemical network model. -
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danaides
Meta data extractor based on ontologies
Danaides stores meta-data from biological banks in a graph databases as well as OBO formatted ontologies. It also provides a web query interface to parse ontologies or extract nodes based on ontology requirements. Example: Get all known elements that are in family of Fish (species ontology) AND a RNA (sequence ontology). -
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PROTOGENE: turning amino acid alignments into bona fide CDS nucleotide alignments, in an automatic way or drive by users.
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The open bicycle computer (oBiCo) is an outdoor computer to be mounted on your bike. We are providing an open source based plattform to ether use Linux based software or go with a small GPL'ed C++ OS (Booting in just 2 seconds)
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CImmerSys is a project for make an specific supervisory and control software for controlling all the devices of a Temporary Immersion System for vitro plants production.
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BIRBU (BIological Relationship BUilder) is a Java tool for microarray gene expression data analysis. BIRBU identifies biologically significant relationship between genes using microarray data and prior knowledge on relationships between genes.
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GraphSpider is a pattern matcher which searches parsed text in phrase-structure tree or dependency graph format for syntactic structures matching a set of patterns in MPL, a regexp-like pattern language. Applications: information extraction, text mining.
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A biological data warehouse that locally stores and integrates biological sequences, molecular interactions, homology information, functional annotations of genes, and biological ontologies. Website: http://bioinformatics.ubc.ca/atlas
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LaboLIM
LIMS System written in PHP
LaboLIM is a laboratory information system aimed at microbiology laboratories. It is licensed under the GPL V3.0. It is written in PHP and currently uses SQLite 2.1, but could be converted to MySQL. It was partially developed with a working micro lab. Looking for some people to chip in and make it a nice project. -
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helese is an easy to use HL7 message to database converter. It converts messages from your hospital information system (HIS) into an easily accessible database for further processing. helese is free open-source software written in Java.
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This project seeks to integrate knowledge, methods and data from various disciplines through the design and implementation of a system that allows for communications between languages and different platforms.
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Basic life is an application that desires to simulate basic life based on some basic chemistry/physics rules. This environment provides particles that can bond, vibrate, react, etc. in order to create basic cells
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Project3dKidneyPrinted
To build a 3d Printer that uses tine micro-pipette of some micrometers
To build a 3d Printer that uses tine micro-pipette of some micrometers of radio to print from a 3d scheme a functional kidney, using steam cells,in 6 months. -
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Decision support tool that assesses breast cancer risk and identifies risk-reducing interventions. Includes web service implementations of established models -- BRCAPRO, Gail, Claus, BCSC Density -- for calculating breast cancer risk.
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Dualword-PMC
PMC browser
PubMed Central browser. Source code: http://github.com/dualword/dualword-pmc/
