Search Results for "c source code" - Page 27
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Showing 809 open source projects for "c source code"
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Cell Motility Analysis Package analyzes timelapse sequences of moving cells. Various quantitites characterizing motility are calculated, including normal velocity of the membrane, cell contact area, and spatio-temporal auto-correlation functions.
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aln2dist is a standalone program that uses a multiple sequence alignment to calculate a set of distance matrices and a set of distance restraints (lower and upper bounds). Also require the pdb structure files of homologous proteins to be used as models.
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sibsim is designed to simulate either genotype and/or quantitative phenotype data in family structures in a modern, easy to use and highly scaleable way. sibsim is based on XML, completely written in C++ and published under the GNU General Public License
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Fast-DCM (Fast-DynamicCausalModelling) is an open-source addon for the SPM5 toolbox (http://www.fil.ion.ucl.ac.uk/spm/software/spm5/). It accelerates the estimation of Dynamic Causal Models.
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GEDAS is a software to perform microarray data analysis with friendly user interface and convenient data display. Currently some commonly used data clustering algorithms have been implemented in this software.
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The field representation projectis based on the Field Representation Language (FRL) and associated tools. Primarily this means the Abstract Field Layer (AFL) - a C++ API for reading, manipulating and writing FRL files.
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mySQL db app that stores chemical structures, calc. descriptors and property values. It has a descriptor calculator and a method that filters descriptors correlated with property values. Easy to plug-in your descriptor calc. Ideal for QSAR specialists!
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Sehr Gut Libs (sglibs) is a set of utility libraries for general and scientific programming. It includes stack and string manipulation, CGI I/O, config file parsing, and sequence-processing for molecular biology.
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Experimental Lindenmayer System generator, in 3D using OpenGL. Used for modeling the fractal growth processes of plants.
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The Canopy project is an initiative to merge and expand the functionality of Perl-speaks-NONMEM (PsN), Census, Xpose and PopED. The goal is to produce a coherent, inclusive and convenient platform for pharmacometric data analysis.
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Sourcer-E is a software for use in Genectic Biology research. Starting from the information collected by the field researcher about on the species contact zone it calculates the center and the width of the hybird zone.
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Genetic programming environment to inference context free grammars base on positive and negative examples of language.
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Life Science Identifier (LSID) resolution protocol, to locate biologically significant data over a network, within middle-ware providing a client A.P.I. for Life Science applications, and server software, for Industry data providers.
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Biological Annotation Tool is a general-purpose high speed environment for manipulating biological sequence annotations in multiple input and output formats. A plugin-style API permits much extensibility.
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Tools for analysis of the phylogenetic structure of ecological communities and the traits of taxa in those communities. Includes phylogeny construction (phylomatic) and manipulation tools. Developed in C for OS X/Linux/MS-DOS.
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EGEETomo aims at creating a grid oriented tool to perform tomographic reconstruction on the field of electron microscopy. It is specially designed to work on the EGEE grid but could be easily adapted to other grid platforms.
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POA is Partial Order Alignment, a fast program for multiple sequence alignment in bioinformatics. Its advantages are speed, scalability, sensitivity, and the superior ability to handle branching / indels in the alignment.
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ProteinFinder - a C language parallel computing engine for tandem protein mass spectrometry database search. ProteinFinder is interfaced with MySQL relational database MassSpec that hosts the experimental data, predicted databases, and search results.
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OOPS means Open Protein Simulator, it is a program designed to serve as a test bed for different algorithms for protein folding, dynamics and structure prediction. OOPS is based on a plugin architecture that makes it highly modular and extensible.
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EvoRadical was written in C. It implements a new codon-based likelihood models for detecting site-specific selection pressures acting on specific physicochemical properties.
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RepeatFinder is a command line tool for generating non-overlapping matches of microsatellite DNA from FASTA format code.
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hmm2gviz is a tool used for converting hidden Markov models generated by HMMER into a graph visualization using Graphviz.
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Simulator of virtual animals made up of biological neural networks for research in the Computational Neuroscience field.
