Showing 5 open source projects for "collection"

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  • 1

    epidaurus

    tumor epigenetic database

    Epidaurus is a collection of epigenetic datasets including transcription factor ChIP-seq, histone ChIP-seq, DNase-seq, FAIRE-seq, DNA methylation, etc. It also includes commonly used genome features (GC content, conservation) and RNA-seq. A user friendly interface has been developed to interrogate and visuzlize these datasets.
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  • 2
    GIIAF Microscopy Library

    GIIAF Microscopy Library

    The GIIAF Microscopy Library, that uses customised OMERO software

    This project incorporates a suite of tools that aim to allow researchers within Griffith's Imaging and Image Analysis Facility (GIIAF) to efficiently and effectively provide secure, centralised, web-accessible data storage, management and manipulation. The open-source Java-based OMERO software was customised to provide most of the features of this project.
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  • 3

    Linking Yabi with RDA

    This software system enables publication of YABI workflows to the RDA.

    ...By sharing the description of their workflows, scientists facilitate the diffusion and re-use of their data. This website provides access to the workflows and datasets that have been made public. By login in, scientist can edit, manage and publish their collection descriptions to the Research Data Australia.
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  • 4

    Linking BPA with RDA

    This software system enables publication of ISA-Tab files to RDA.

    ...With the support of ANDS, QFAB has developed this web application to enable the publication of these datasets to Research Data Australia (RDA). By login in, BPA can upload ISA-Tab descriptions of their studies and can edit, manage and publish their collection descriptions to Research Data Australia.
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  • 5
    The Patient and Sample System for Information Management (PASSIM) is a system for annotation and storage of data, associated with the collection of samples in biomedical studies.
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