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Rediscover the Simplicity http://www.atgclabs.com/
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Freezer Web Access is a user friendly program designed to assist researchers with establishing an efficient system for storing frozen biological samples.
FWA can track all of your research, development and process scale-up data in a single data storage platform, providing a...
Rediscover the Simplicity http://www.atgclabs.com/
Help us to improve Freezer Web Access. We want to hear your feedback!
Request new Freezer Web Access feature or module and receive a free Single User version with new feature.
https://www.atgclabs.com/products/fw
Freezer Web Access is a user friendly program designed to assist researchers with establishing an efficient system for storing frozen biological samples.
FWA can track all of your research, development and process scale-up data in a single data storage platform, providing a...
...For a longer high-level description of Hadoop-BAM, refer to the article "Hadoop-BAM: directly manipulating next generation sequencing data in the cloud" in Bioinformatics Volume 28 Issue 6 pp. 876-877, available online at: http://dx.doi.org/10.1093/bioinformatics/bts054
Note that the library part of Hadoop-BAM is mainly for developers with experience in using Hadoop. The command line tools of Hadoop-BAM should be understandable to all users, but they are limited in scope.
See the SeqPig project for a higher-level interface to the file formats supported by Hadoop-BAM: http://seqpig.sourceforge.net
See Seal for Hadoop-based read alignment tools, Seal: http://biodoop-seal.sourceforge.net
CallSim is a software application that provides evidence for the validity of base calls believed to be sequencing errors and it is applicable to Ion Torrent and 454 data.
CallSim provides a final classification or rescue of a base/indel in reads, where putative variants have been identified via typical SNP/indel workflows.
plots rendered by: JFreeChart library http://sourceforge.net/projects/jfreechart/
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...The method details are explained in the following paper:
Ehsan Emadzadeh, Azadeh Nikfarjam, and Graciela Gonzalez. 2011. Double Layered Learning for Biological Event Extraction from Text. In Proceedings of the BioNLP 2011 Workshop Companion Volume for Shared Task, Portland, Oregon, June. Association for Computational Linguistic
A software tool enabling the user to browse through an image stack created by a confocal microscope. Points can be plotted through the stack, producing a digital 3D representation, which can be viewed in 3D and compared with other plots.