8 projects for "cgi" with 2 filters applied:

  • Atera all-in-one platform IT management software with AI agents Icon
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  • 1
    hr ("High Resolution") is a small command-line utility to calculate possible elemental compositions for a given mass. It allows to run calculations interactively, in batch mode, via the command line, or (using a webserver) via a web interface.
    Downloads: 0 This Week
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  • 2
    e-Species

    e-Species

    A taxonomically intelligent biodiversity search engine

    This is a pure Python CGI-based implementation of a taxonomically intelligent species search engine. It searches biological databases for a taxonomic name. The search is done "on the fly" using web services (SOAP/XML) or URL API's.
    Downloads: 0 This Week
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  • 3

    miRStat

    identification of common sets of microRNAs for groups of genes

    ...This Python application is based on the TargetScan 6.2 microRNA target prediction data. Conserved and Nonconserved site context+ scores files are required (unzip and place to directory with program). Available at http://targetscan.org/cgi-bin/targetscan/data_download.cgi?db=vert_61
    Downloads: 0 This Week
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  • 4

    GenNon-h

    Simulating non-homogeneous multiple sequence alignments

    ...Based on the input model and a phylogenetic tree in the Newick format (with branch lengths measured as the expected number of substitutions per site), the algorithm produces DNA alignments of desired length. GenNon-H is a collaborative project described at http://genome.crg.es/cgi-bin/phylo_mod_sel/AlgGenNonH.pl.
    Downloads: 0 This Week
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  • Outgrown Windows Task Scheduler? Icon
    Outgrown Windows Task Scheduler?

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  • 5
    Genome-tools provides flexible tools and a simple API for genomic sequence processing on genomes published in the standard Genbank format. A CGI-based web interface is also available. Please cite: Lee, W., Chen S.L. BioTechniques 33:1334-1341 (Dec 20
    Downloads: 1 This Week
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  • 6
    Software for making Clusters of Orthologous Groups (featuring the new EdgeSearch algorithm). Latest ref: Kristensen DM, Kannan L, Coleman MK, Wolf YI, Sorokin A, Koonin EV, Mushegian A. Bioinformatics 2010.
    Downloads: 0 This Week
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  • 7
    ArrayPipeLine is a web-based Laboratory Information Management system, using MySQL, Perl CGI and R. It enables high-throughput analysis of microarray data, providing automation of data handling, and rapid creation and implementation of analysis pipelines
    Downloads: 0 This Week
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  • 8
    The project aims to extend the PHP scripting language to enable PHP developers to write bioinformatics applications more rapidly than if they had to start from scratch using \"vanilla php\".
    Downloads: 0 This Week
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