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  • 1
    Comet MS/MS search engine

    Comet MS/MS search engine

    Comet open source tandem mass spectrometry (MS/MS) search engine.

    ...Comet currently exists as a simple Windows or Linux command line binary that only does MS/MS database search. Supported input formats are mzXML, mzML, ms2, and Thermo RAW files. Supported output formats are tab-delimited text, Percolator pin, SQT, and pepXML Documentation and project website: http://comet-ms.sourceforge.net
    Downloads: 5 This Week
    Last Update:
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  • 2

    bint

    Converts intensity text files to binary for fast subsetting

    ...Either the X & Y intensities for creating cluster plots or Log R Ratio and B Allele Frequencies for CNV detection. Extracting the data for individual SNP/CNV markers or individual samples was slow grep/awk'ing the text files exported from the genotyping run (e.g. Illumina final report files). bint converts the text representation of the intensity float data to into a IEEE754 indexed binary file for rapid extraction of subsets of the data. In theory bint could be used for any large tables of float data.
    Downloads: 0 This Week
    Last Update:
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  • 3
    FFP (Feature frequency profile) is an alignment free comparison tool for phylogenetic analysis and text comparison. It can be applied to nucleotide sequences, complete genomes, proteomes and even used for text comparison.
    Downloads: 0 This Week
    Last Update:
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