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Showing 7 open source projects for "structural engineering"

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    SBEVSL is a collaborative project between Dowling and RIT on the development of a Structural Biology Extensible Visualization Scripting Language, so that users can move freely among various molecular graphics tools, such as rasmol, pymol, raster3d, etc.
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  • 2

    PSICOV

    The unofficial binary for PSICOV: Protein Sparse Inverse COVariance

    PSICOV (Protein Sparse Inverse Covariance estimation program) is a coevoultion algorithm applied to very large (typically >=1000 sequences) multiple sequence alignments for precise protein structural contact prediction. This is the unofficial precompiled Windows binary for PSICOV compiled by Chengxin Zhang at Fudan University. The source code is copyrighted by David T. Jones, University College London.
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  • 3
    The structural analysis library is a C/C++ portable software library for analyzing the structural properties of stoichiometric networks
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  • 4
    CSEA

    CSEA

    Correcting Structural Errors After Genome Assembly

    CSEA is a suite of programs for correcting structural errors after assembly without reference, improve the quality of genome assembly. The program is specially designed for second-generation sequencing reads. It also can do denovo assembly and correct errors. Contact: jbtangcn@gmail.com
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  • 5
    Detection of structural variants and indels from Genome/Exome sequencing data
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  • 6
    HOPPscore is a simple application for evaluating the structural quality of theoretical or experimental protein structures. Protein are evaluated by comparing structure fragments to a reference dictionary of fragments from high resolution structures.
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  • 7
    SureFit generates 3D mesh surfaces (in VTK and Caret formats) from 3D structural MRI volumes (in formats such as Analyze, AFNI, raw).
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