Search Results for "mining"

An open source framework for LC-MS based proteomics and metabolomics. OpenMS offers data structures and algorithms for the processing of mass spectrometry data. The library is written in C++. Our source code and wiki lives on GitHub (https://github.com/OpenMS/OpenMS).

To download please go to Browse All Files for the complete pack! In mass spectrometry the detector responses are not always directly proportional to the quantity of compounds. Large peaks in LCMS traces are not equal to major components but their ionizability. The effectiveness of a medicinal plant, poisons in a mushroom, resistance and susceptibility to pest and diseases are not necessarily because of the compounds that give large peaks. These traits are determined by the different...

...This method can generate three-dimensional chromosomal models satisfying a large portion of chromosomal contacts. The software is developed in Prof. Jianlin Cheng's Bioinformatics, Data Mining and Machine Learning Laboratory in the Computer Science Department at the University of Missouri - Columbia, USA. The project is supported by the National Science Foundation (grant no. DBI1149224). If you use Gen3D in your research, please cite: Nowotny, Jackson, Sharif Ahmed, Lingfei Xu, Oluwatosin Oluwadare, Hannah Chen, Noelan Hensley, Tuan Trieu, Renzhi Cao, and Jianlin Cheng. ...

BIL++ is a set of standalone C++ packages for data processing in Bioinformatics (Graph mining, Bayesian networks, Genetic algorithm, Discretization, Gene expression data analysis, Hypothesis testing).

A data mining tool for finding frequent motifs in DNA regulatory area that may play significant role in gene regulation. It makes the search more efficient by using different data like conservation and binding scores about relevant promoter areas. It is implemented as a part of Barchelor thesis work of Timo Petmanson available here: http://comserv.cs.ut.ee/forms/ati_report/downloader.php?