CBFLIB is a library of ANSI-C functions providing a simple mechanism for accessing Crystallographic Binary Files (CBF files) and Image-supporting CIF (imgCIF) files. The CBFLIB API is loosely based on the CIFPARSE API for mmCIF files.
Converts intensity text files to binary for fast subsetting
...Extracting the data for individual SNP/CNV markers or individual samples was slow grep/awk'ing the text files exported from the genotyping run (e.g. Illumina final report files). bint converts the text representation of the intensity float data to into a IEEE754 indexed binaryfile for rapid extraction of subsets of the data. In theory bint could be used for any large tables of float data.
Utility to convert the binaryfile format from an
ABI PRISM TM 377 DNA Sequencer to an xml file.
New project page:
https://github.com/eriksjolund/abi2xml
abi2xml was migrated to Github 6 February 2020.