Showing 9 open source projects for "matlab project for image processing"

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    ProStack

    ProStack

    ProStack - a platform for image processing and analysis

    ProStack - a platform for image processing and analysis. It implements various image processing methods as separate modules, that can be joined in a complex image processing scenario by use of a graphical user interface. RPMs are available at https://build.opensuse.org/project/repositories/home:mackoel:compbio
    Downloads: 4 This Week
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  • 2
    ANDTool

    ANDTool

    Analysis Nuclei DAB (AND) Tool

    ... the sample in three regions according to the FastRed channel: a dark-red ROI, a light-pink ROI and a white ROI. ANDTool is written in MATLAB (The MathWorks, Inc., Massachusetts, USA) and the source code and standalone versions are here available for download. USER MANUAL: see the specific PDF available in the Files section. REQUIREMENTS: MATLAB R2017b and Image Processing Toolbox 10.1 or later versions. MAIN CONTACT: Filippo Piccinini (E-mail: filippo.piccinini85@gmail.com)
    Downloads: 0 This Week
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  • 3
    ReViMS

    ReViMS

    ReViMS, a 3D volume rendering tool for light-sheet/confocal microscopy

    ... for: (a) segmenting z-stacks of fluorescence images; (b) reconstructing the 3D surface of the aggregates and estimating several features (including the volume). ReViMS is written in MATLAB (The MathWorks, Inc., Massachusetts, USA). It is an open-source tool and the source code is freely available at: http://sourceforge.net/p/revims Requirements: MATLAB R2017b and Image Processing Toolbox 10.1 or later versions.
    Downloads: 1 This Week
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  • 4
    F-Tracker3D

    F-Tracker3D

    A software tool for tracking fluorescent cells in 3D

    ...-plane with the maximum intensity value for the different x-y positions previously determined. F-Tracker3D is written in MATLAB (©, The MathWorks, Inc., Massachusetts, USA) and the source code is freely provided. Requirements: MATLAB 2015a and Image Processing Toolbox 9.2 or later versions.
    Downloads: 0 This Week
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  • 5
    MCCCS

    MCCCS

    Multi Channel Classification and Clustering

    Here we present an image-based Multi Channel Classification and Clustering System (MCCCS). It is an generalized, script-based classification system for processing various kinds of image data. Due to the modular design, individual processing-components can be easily adapted, extended or exchanged by own extensions. See project website for installation instructions.
    Downloads: 1 This Week
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  • 6
    MORPHE

    MORPHE

    MORphological PHenotype Extraction

    MORphological PHenotype Extraction (MORPHE) is a suite of automated image processing, visualization, and classification algorithms to facilitate the analysis of heritable and clonal red-to-green transitions that occurred during the growth of a colony.
    Downloads: 0 This Week
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  • 7
    PANorama2.0

    PANorama2.0

    PANorama: Panicle phenotyping for Oryza sativa

    PANorama is a Linux-compatible, open-source software package for panicle image acquisition, processing, and phenotyping. PANorama 2.0 contains new phenotype measurements and is available for download within the "Files" tab listed above. Installation and user instructions are located within the "Wiki" tab. How to videos are available for streaming at the link below, or for download in the "Files" tab above. Information regarding the project and funding can be found at http...
    Downloads: 1 This Week
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  • 8
    Biolet is project aimed to analyze genomic DNA sequences using wavelets. Of additional interest may be a batch processing tool for doing round-robin scheduling of jobs on a beowulf cluster. For that checkout the project robin from the CVS.
    Downloads: 0 This Week
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  • 9
    The Banane project is a collection of MATLAB routines for processing, analysis and visualization of neurophysiological data, in particular multiple sequences of action potentials, as are commonly recorded with multielectrode arrays.
    Downloads: 0 This Week
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