Showing 90 open source projects for "java mysql"

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  • 1
    MOLGENIS can be used to generate databases for life science experiments (micrroarray, mass spectrometry, genomics) having a web user interface, csv exchange format, and programmatic interfaces (web services, rest, and r-project). See NatRevGen 8.
    Downloads: 0 This Week
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  • 2
    PowerTalk automatically speaks Microsoft PowerPoint presentations. For presenters who find speaking difficult, audiences containing people with visual impairments and fun educational uses. Uses synthesised computer speech provided with Windows
    Downloads: 15 This Week
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  • 3
    Moara is a biological text mining tool and consists of a Java library and some auxiliary MySQL databases for gene/protein training and extraction of mentions and its further normalization and disambiguation.
    Downloads: 0 This Week
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  • 4
    Care4G is a web-based software, as forking of the most famous care2x, it will be a complete HIS for the II Millennium...
    Downloads: 0 This Week
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  • 5
    This project develops a web-based (JSP) Fuzzy Rule-Based Expert System for analyzing ECG (electro cardio gram) signals & diagnosing Tachi-Arrhythmias. Proj. main blocks: inference engine, knowledgebase, KB editor, explanation, and feature extraction.
    Downloads: 0 This Week
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  • 6
    PhenoFam is a web-based application that performs gene set enrichment analysis (GSEA) by employing structural and functional information on families of protein domains as annotation terms.
    Downloads: 0 This Week
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  • 7
    HealthAgents is an open source web-based distributed decision support system (DSS) which provides hospitals and organisations with a reliable tool to aid in the diagnosis of brain tumours and their prognosis aiming to avoid invasive surgical procedures
    Downloads: 0 This Week
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  • 8
    OmicBrowse, developed with Flash and Java, is a highly evaluated genome browser integrating omics knowledge ranging from genomes to phenomes and is especially appropriate for positional-cloning purposes.
    Downloads: 0 This Week
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  • 9
    This is a reference implementation of snoBAC, a Bayesian Classifier designed to predict box H/ACA snoRNAs in Caenorhabditis nematode genomes. For details of algorithm and data, see Wang and Ruvinsky (2009) RNA in press.
    Downloads: 0 This Week
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  • 10
    Multimedia, Medicine Computing and BioInformatics --- This Project is a collection of several subprojects for Solutions in Multimedia, Medicine Computing and BioInformatics focus on video-,EEG- & Multichanels-signals developped in Web 20, J2EE.
    Downloads: 0 This Week
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  • 11
    The system is designed for the automated analysis of high throughput sequencing data. At present Aped is focused on the analysis of data derived from Sanger and 454 sequencing. Additional functionality exists for SAGE and taxonomic profiling.
    Downloads: 0 This Week
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  • 12
    FreeLIMS  |  Free LIMS

    FreeLIMS | Free LIMS

    Laboratory Information Management System

    FreeLIMS is a Laboratory Information Management System ( LIMS ). Manage samples; create sample types from methods & parameters; easily generate reports & certificates; fine tune user rights. FreeLIMS is Open Source and Free.
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    Downloads: 54 This Week
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  • 13
    BioSunMS, a flexible software platform for submission, management, retrieval of sample and MS data(MALDI or SELDI), and clinical proteomics-related statistical analysis. BioSunMS integrated all functions into a user-friendly desktop RCP application.
    Downloads: 0 This Week
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  • 14
    Data and animal management software for large-scale phenotype screening Used by GNF for mouse ENU mutagenesis project. Data visualization & analysis, animal husbandry management, & automated QTL mapping. Usable as stand alone animal husbandry system.
    Downloads: 0 This Week
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  • 15
    PepT-IDE is a protein analysis tool that is used for multiple sequence alignment, 3D visualization and displaying protein contact maps for protein sequences and structures. It also has feedback communication between the different views of the protein.
    Downloads: 0 This Week
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  • 16
    CLIMS is a Laboratory Information Management System for protein Crystallography that features a novel graphical interface to a relational database. CLIMS has been reviewed as one of the top two LIMS for crystallographers by CCP4.
    Downloads: 0 This Week
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  • 17
    GRIP is a clinical decision support system for controlling glucose levels in critically ill patients. GRIP may replace paper-based protocols for intensive insulin therapy and can use arbitrary complex rules to advise nurses on insulin doses.
    Downloads: 0 This Week
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  • 18
    Biological General Repository for Interaction Datasets (BioGRID) is a curated biological database of protein-protein interactions. It strives to provide a comprehensive resource of Protein-Protein interactions for all major species.
    Downloads: 0 This Week
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  • 19
    Large set of functions for biological records (ECG, EEG, phono), datastore, datamining and analysis (HRV, QT, RR, ST). The application is written in Java, so that it is assumed to work on all devices. It runs as a desktop or client-server application. It
    Downloads: 0 This Week
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  • 20
    The BioArray Software Environment (BASE) v1.2 is a comprehensive free web-based database solution for the massive amounts of data generated by microarray analysis. PrognoChip-BASE extends BASE v1.2.16, providing more functionalities.
    Downloads: 0 This Week
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  • 21
    EuroPhenome - a database for Mouse phenotype data
    Downloads: 0 This Week
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  • 22
    NetAtlas is a Cytoscape plugin that uses tissue gene expression data to filter cellular signaling network. The plugin identifies of tissue-defined networks, tissue-specific network components, and components with correlated expression across tissues.
    Downloads: 0 This Week
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  • 23
    The Genomic Diversity and Phenotype Connection (GDPC) written in JAVA uses web services to make XML formatted data publicly available. The GDPC Browser (front-end GUI) can access these services, and other applications can use the API.
    Downloads: 1 This Week
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  • 24
    Trauma registry suite; Data collection application and server scripts to build trauma data warehouse and perform web-based analysis reporting. Cross-platform compatible for Windows, Apple, Unix, or Linux.
    Downloads: 0 This Week
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  • 25
    Frida is image analysis software. Frida was developed by the Johns Hopkins University Tissue Microarray Core Facility. It is open source and written in 100% Java. Frida makes use of functionality from the NIH's ImageJ application. Note: Frida was integr
    Downloads: 0 This Week
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