Showing 96 open source projects for "visual basic format"

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  • 1
    GenomeRunner

    GenomeRunner

    Annotation and enrichment of Next-Gen sequencing data

    Note: This version requires additional SQLite database files. Contact the developers to obtain them. Use http://www.integrativegenomics.org/ for the latest data and analyses. GenomeRunner is a tool for automating genome exploration. It performs annotation and enrichment analyses of user-provided genomic regions (SNPs, ChIP-seq binding sites etc.) against >6,000 (human genome) epigenomic features available from the UCSC genome browser. Input - any genome-wide data data in .bed...
    Downloads: 1 This Week
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  • 2
    Source Synchro

    Source Synchro

    Synchronise your MassLynx ipr settings

    Synchronise your MassLynx ipr settings across Modes and Polarities. No more forgetting to change the temperature on High Resolution setting! Intended for Waters ToF Mass Spectrometers
    Downloads: 0 This Week
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  • 3

    Tools for T-RFLP data analysis

    VB macros and a template for the analysis of T-RFLP data using Excel.

    A collection of Visual Basic macros and a template for the analysis of terminal restriction fragment length polymorphism data using Microsoft Excel.
    Downloads: 0 This Week
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  • 4
    ResCalc3

    ResCalc3

    Spectral resolution calculator for MassLynx

    Spectral resolution calculator for MassLynx and now UNIFI. ResCalc3 determines and reports the spectral resolution from a list of mass intensity pairs or MassLynx spectrum. The list can be either in the clipboard or in a text file. It is intended for use with data from either ToF or Quadrupole Instruments and reports the resolution of the most intense peak in the data. The resolution can be optionally compared to a threshold you specify and the result is displayed as Pass/Fail using...
    Downloads: 0 This Week
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  • 5

    Darwin_Test 3.3

    Darwin Test is a software application to validate and correct records

    Darwin Test is a software application to validate and correct records from standards Darwin Core 1.2, Darwin Core 1.4 and Darwin Core Archive. It also can generalize or delete coordinates in those records of the Darwin Core that are considered sensitive data.
    Downloads: 0 This Week
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  • 6
    MFPaQ allows fast and user-friendly verification of Mascot result files, as well as data quantification from proteomics experiments. It supports several quantification approaches: isotopic labeling (SILAC, ICAT, ICPL, N14/N15...) and label-free.
    Downloads: 0 This Week
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  • 7

    Lightened Dream

    A free journal designed for dreamers in search of lucidity.

    “Follow its directions and you will be bending the laws of reality while getting a good night’s rest.”
    Downloads: 0 This Week
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  • 8
    siMacro is simple GUI tool for cell based genome wide siRNA screen data processing. It calculates statistical parameters such as Z score and robust Z score.
    Downloads: 0 This Week
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  • 9
    Tools for mass spectrometry, especially for protein mass spectrometry and proteomics: Quantification tools, converters for Applied Biosystems (Q Star and Q Trap), calculation of in-silico fragmentation spectra, converter for Mascot result files
    Downloads: 0 This Week
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  • 10

    HZL 4.1

    Software to manage and digitize botanical and zoological collections

    HZL 4.1 is the updated version of a software application based on MS-Access, designed to manage and digitize botanical and zoological collections
    Downloads: 0 This Week
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  • 11
    SeqHunter2

    SeqHunter2

    a stand-alone bioinformatics software for querying genome sequences

    SeqHunter2 is a stand-alone software with graphical user interface, running on Microsoft windows system. It is programmed with the following functions: 1) collect and manage local sequence databases; 2) run blast search by using a batch of sequences and with abundant output formats; 3) extract sequences by a set of IDs or coordinates; 4) generate sequences alignment; 5) edit sequence and translate nucleotide to proteins; 6) browse genome and search genes; 7) collect resource items and link...
    Downloads: 1 This Week
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  • 12
    BioWord

    BioWord

    A Microsoft Word add-in for biological sequence manipulation

    BioWord, a Microsoft Word add-in, allows instant access to most sequence manipulation needs, such as reverse-complementing, translating or FASTA formatting, and features a full suite of sequence search methods, pair-wise alignment and motif discovery.
    Downloads: 3 This Week
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  • 13

    Pysimony

    A Pythonic Implementation of Parsimony Inference of Phylogeny

    ...A student's first attempt at a phylogenetic inference program, written in the simplistic yet elegant Python. Pysimony reads a FASTA file (only ATGC accepted) specified as its only argument. Basic testing has shown that it is slow, inaccurate and most definitely inefficient. An unlikely-to-be-the-most-parsimonious tree is printed upon completion in basic Newick tree format. As all parts of the program are the original work of a beginner programmer, this may represent one of the worst approaches to solving the phylogenetic problem. ...
    Downloads: 0 This Week
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  • 14

    Darwin_Test 3.2

    Sortware application to validate and check records.

    Darwin Test is a software application to validate and check records from tables in a Darwincore1.2 or Darwincore1.4 format. It also exports the previous formats to the Darwin Core Archive standard and allows the inverse process. Also can transform tables from Darwincore1.2 to Darwincore1.4 and the inverse process from Darwincore1.4 to Darwincore1.2.
    Downloads: 0 This Week
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  • 15
    imDEV

    imDEV

    Tools for multivariate data visualization, exploration and analysis.

    You may also like some newer work: http://createdatasol.com/ Project imDEV is an application of RExcel, which seamlessly integrates Excel and R for tasks focused on multivariate data visualization, exploration, and analysis. Interactive modules for dimensional reduction (imPCA), prediction (imPLS), feature selection, analysis of correlation (imCorrelations) and generation of networked structures (imGraph) provide an integrated environment for systems level analysis of multivariate data.
    Downloads: 0 This Week
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  • 16

    FASTApple

    AppleScript Utilities for Working Quickly with the FASTA File

    ...GenBank Renamer automatically renames the taxa in a FASTA file downloaded from GenBank in the format Genus_species_accession
    Downloads: 0 This Week
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  • 17
    Generic ASP.NET XML interface to heterogeneous databases for the TAPIR protocol
    Downloads: 0 This Week
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  • 18
    CNViewer

    CNViewer

    CNViewer shows CNV and LOH data in affected and unaffected individuals

    CNViewer is designed to allow the visual comparison of copy number (CN state) and loss of heterozygosity (LOH) data from Affymetrix SNP 6.0 microarrays between affected and unaffected members of a pedigree. The program aims to allow the identification of regions where the values of either the CN state or the LOH scores are the same in all the affected individuals, but none of the unaffected individuals have the same value. As well as visualising the CN state and LOH data, the program will...
    Downloads: 0 This Week
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  • 19
    3D Realtime Simulation der Evolution des Lebens. Frei erweiterbares Gen/Mutations-System mit Direct3D-Engine. <b>Wichtig ".NET 2.0 beta"-basierent !</b> Also wird zumindest ein Visual Basic 2005 Express Beta benötigt.
    Downloads: 0 This Week
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  • 20
    Herbar 3.7 is the updated version of a software application based on MS-Access, designed to manage and digitize botanical collections. Find credits and further information about Herbar 3.7 on its website: http://www.gbif.es/herbar/herbar.php
    Downloads: 0 This Week
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  • 21

    GuiTope

    Identifies significant regions in proteins from peptide selections.

    ...GuiTope provides a convenient method for comparing selected peptide sequences to protein sequences, including flexible alignment parameters, novel alignment features, ability to search a database, and statistical significance of results. It was implemented in Visual Basic, using the Microsoft .NET framework.
    Downloads: 0 This Week
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  • 22

    Darwin_Test 3.1

    Validate records from tables Darwincore 1.2 or 1.4

    Darwin Test is a software application to validate and check records from tables in a Darwincore1.2 or Darwincore1.4 format. It also exports the previous formats to the Darwin Core Archive standard and allows the inverse process.
    Downloads: 0 This Week
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  • 23
    fastQ format data visual quality
    Simple python code that produces color-coded quality plots based on fastq format read quality scores. Scores are averaged over binned read tile coordinates. Useful for spotting spatial quality patterns.
    Downloads: 0 This Week
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  • 24
    Diversity Maps
    Diversity Maps is a data visualization tool for plant geneticists and breeders. It generates publication-quality, vector-based chromosome maps displaying differences in marker states between individuals.
    Downloads: 0 This Week
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  • 25
    HZL Beta 3 is the updated version of a software application based on MS-Access, designed to manage and digitize botanical and zoological collections.
    Downloads: 0 This Week
    Last Update:
    See Project