Showing 4 open source projects for "distributed computing"

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    Nebula Graph

    Nebula Graph

    A distributed, fast open-source graph database

    The graph database built for super large-scale graphs with milliseconds of latency. Optimized SUBGRAPH and FIND PATH for better performance. Optimized query paths to reduce redundant paths and time complexity. Optimized the method to get properties for better performance of MATCH statements. Nebula Graph adopts the Apache 2.0 license, one of the most permissive free software licenses in the world. Free as in freedom, because, under the Apache 2.0 license, you can use, copy, modify and...
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  • 2

    MarDRe

    MapReduce-based tool to remove duplicate DNA reads

    ...MarDRe is the Big Data counterpart of ParDRe (link above), which employs HPC technologies (i.e., hybrid MPI/multithreading) to reduce runtime on multicore systems. Instead, MarDRe takes advantage of the MapReduce programming model to significantly improve ParDRe performance on distributed systems, especially on cloud-based infrastructures. Written in pure Java to maximize cross-platform compatibility, MarDRe is built upon the open-source Apache Hadoop project, the most popular distributed computing framework for Big Data processing.
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  • 3

    HSRA

    Hadoop spliced read aligner for RNA-seq data

    ...This tool allows bioinformatics researchers to efficiently distribute their mapping tasks over the nodes of a cluster by combining a fast multithreaded spliced aligner (HISAT2) with Apache Hadoop, which is a distributed computing framework for scalable Big Data processing. HSRA currently supports single-end and paired-end read alignments from FASTQ/FASTA datasets. Moreover, our tool uses the Hadoop Sequence Parser (HSP) library (link above) to efficiently read the input datasets stored on the Hadoop Distributed File System (HDFS), being able to process datasets compressed with Gzip and BZip2 codecs.
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  • 4
    Cube Platform is a decentralized grid computing system that uses P2P Pastry protocol for communication between nodes. It's a big data storage written in Java.
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