Showing 3 open source projects for "data mapping"

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    Apache Hudi

    Apache Hudi

    Upserts, Deletes And Incremental Processing on Big Data

    Apache Hudi (pronounced Hoodie) stands for Hadoop Upserts Deletes and Incrementals. Hudi manages the storage of large analytical datasets on DFS (Cloud stores, HDFS or any Hadoop FileSystem compatible storage). Apache Hudi is a transactional data lake platform that brings database and data warehouse capabilities to the data lake. Hudi reimagines slow old-school batch data processing with a powerful new incremental processing framework for low latency minute-level analytics. Hudi provides efficient upserts, by mapping a given hoodie key (record key + partition path) consistently to a file id, via an indexing mechanism. ...
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  • 2

    HSRA

    Hadoop spliced read aligner for RNA-seq data

    HSRA is a MapReduce-based parallel tool for mapping reads from RNA sequencing (RNA-seq) experiments. RNA-seq analyses typically begin by mapping reads to a reference genome in order to determine the location from which the reads were originated, which is a very time-consuming step. This tool allows bioinformatics researchers to efficiently distribute their mapping tasks over the nodes of a cluster by combining a fast multithreaded spliced aligner (HISAT2) with Apache Hadoop, which is a distributed computing framework for scalable Big Data processing. ...
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  • 3
    Vaex

    Vaex

    Out-of-Core hybrid Apache Arrow/NumPy DataFrame for Python

    ...Visualization is done using histograms, density plots and 3d volume rendering, allowing interactive exploration of big data. Vaex uses memory mapping, zero memory copy policy and lazy computations for best performance (no memory wasted). Cut development cut development time by 80%. Your prototype is your solution. Create automatic pipelines for any model.
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