Search Results for "util-linux" - Page 3
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Showing 86 open source projects for "util-linux"
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MarDRe
MapReduce-based tool to remove duplicate DNA reads
MarDRe is a de novo MapReduce-based parallel tool to remove duplicate and near-duplicate DNA reads through the clustering of single-end and paired-end sequences from FASTQ/FASTA datasets. This tool allows bioinformatics to avoid the analysis of not necessary reads, reducing the time of subsequent procedures with the dataset. MarDRe is the Big Data counterpart of ParDRe (link above), which employs HPC technologies (i.e., hybrid MPI/multithreading) to reduce runtime on multicore systems.... -
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HSRA
Hadoop spliced read aligner for RNA-seq data
HSRA is a MapReduce-based parallel tool for mapping reads from RNA sequencing (RNA-seq) experiments. RNA-seq analyses typically begin by mapping reads to a reference genome in order to determine the location from which the reads were originated, which is a very time-consuming step. This tool allows bioinformatics researchers to efficiently distribute their mapping tasks over the nodes of a cluster by combining a fast multithreaded spliced aligner (HISAT2) with Apache Hadoop, which is a... -
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apache spark data pipeline osDQ
osDQ dedicated to create apache spark based data pipeline using JSON
This is an offshoot project of open source data quality (osDQ) project https://sourceforge.net/projects/dataquality/ This sub project will create apache spark based data pipeline where JSON based metadata (file) will be used to run data processing , data pipeline , data quality and data preparation and data modeling features for big data. This uses java API of apache spark. It can run in local mode also. Get json example at https://github.com/arrahtech/osdq-spark How to... -
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fooltrader
Quant framework for stock
Build a standard data schema, and then implement various connectors to import systems you are familiar with for analysis. fooltrader is a quantitative analysis trading system designed using big data technology, including data capture, cleaning, structuring, calculation, display, backtesting and trading. Its goal is to provide a unified framework for the whole market (stock, futures, bonds, foreign exchange, digital currency, macroeconomics, etc.) for research, backtesting, forecasting, and... -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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Redis Desktop Manager
:wrench: Cross-platform GUI management tool for Redis
Redis Desktop Manager is a fast, open source Redis database management application based on Qt 5. It's available for Windows, Linux and MacOS and offers an easy-to-use GUI to access your Redis DB. With Redis Desktop Manager you can perform some basic operations such as view keys as a tree, CRUD keys and execute commands via shell. It also supports SSL/TLS encryption, SSH tunnels and cloud Redis instances, such as: Amazon ElastiCache, Microsoft Azure Redis Cache and Redis Labs. -
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paralline
Big Data tool
Paralline executes a python function (or lambda function) or a script over each line of huge text files, in parallel processes and aggregates the result to a list. -
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Vaex
Out-of-Core hybrid Apache Arrow/NumPy DataFrame for Python
Data science solutions, insights, dashboards, machine learning, deployment. We start at 100GB. Vaex is a high-performance Python library for lazy Out-of-Core data frames (similar to Pandas), to visualize and explore big tabular datasets. It calculates statistics such as mean, sum, count, standard deviation etc, on an N-dimensional grid for more than a billion (10^9) samples/rows per second. Visualization is done using histograms, density plots and 3d volume rendering, allowing interactive... -
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PanoramaServer
Open Source Panorama Server for free virtual tour of 360 degrees views
Ideal for creating virtual tours of panoramic views for all sorts including property exhibition for brokers at real estate agencies/property agents, tour guide for indoor/outdoor venues, information to public/private facilities for curators, travel journal for tourist as log book, backdrop setting for storytelling, treasure hunt like games, big data mining for pattern through computer vision in artificial intelligence, etc. It is like creating your own Google Map Street View. All is required... -
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Neuro
The Neuro crypto currency
The Neuro NRO cryptocurrency is designed to support solutions of machine learning tasks, big data and neural networks. Neuro is a scientific-technical project uniting scientists, engineers and programmers inspired by the idea to build something big, kind and bright. From the first stages of work, we will be engaged in the development of new architectures and algorithms of neural networks. Someday we will undoubtedly enter the annual ImageNet Challenge contest to compete with such giants as... -
Go From AI Idea to AI App FastAccess Gemini 3 and 200+ models. Build chatbots, agents, or custom models with built-in monitoring and scaling.
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Random Bits Forest
RBF: a Strong Classifier/Regressor for Big Data
We present a classification and regression algorithm called Random Bits Forest (RBF). RBF integrates neural network (for depth), boosting (for wideness) and random forest (for accuracy). It first generates and selects ~10,000 small three-layer threshold random neural networks as basis by gradient boosting scheme. These binary basis are then feed into a modified random forest algorithm to obtain predictions. In conclusion, RBF is a novel framework that performs strongly especially on data... -
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json4sapnw
Another JSON extension for SAP ABAP
This is a SAP addon to handle JSON data within SAP ABAP Programs. It comes in the customer exchange namespace /CEX/ and has to be installed as an SAP transport request. The addon supports object oriented JSON methods to process deep structured JSON data. Building JSON data from SAP data objects and parsing JSON data back to SAP data objects are supported. See the WIKI for some examples. Thanks to the SAP community and especially to Rüdiger Plantiko for the basic work... -
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Random Bits Regression
Random Bits Regression is a strong general predictor.
We proposed an accurate, robust and fast general predictor (RBR) for regression and classification in big data era. The application of this method is very broad, from science to industry, finance and health. The accuracy and robustness improvement of our method over existing method could bring huge benefits in some critical applications. For example, natural disaster prediction, stock price prediction, personal/population disease prediction. The fast-speed nature of our method not only... -
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iCubing
Several OLAP algorithms, data structures and HPC OLAP versions
OLAP technology is very useful for decision makers and data mining tools with BIG data. In this direction, we implement iCubing project with several multidimensional data cube approaches for cube indexing, querying, updating and mining. There are also several cube types, i.e. alphanumeric cubes, text cubes with unstructured data and geo cube with geo types, dimensions, measures and hierarchies, so the OLAP area continues a hard challenge after more than 20 years of the seminal paper of Jim... -
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ankus
Data Mining and Machine Learning Algorithms based on MapReduce
[The feature of ankus] * ankus is a 'web-based big data mining project and tool'. - MapReduce-based data mining/machine learning algorithms library - Hadoop-based distributed bigdata system - offering a web-based GUI for easy use [The ankus project & License] * The ankus project consists of three as an open source. * ankus has Dual licensed under the community and commercial licenses. * community license is following GPLv3 - Some algorithms in Core Project do not... -
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GOBIG is a toolbox that can be used for detecting genetic variations. The project is intended to handle big data. What's more important is that it be used to detect clusters of SNP variants. It is the intention to use the toolbox with common and rare variants. To use it, for example, to find the genetic map of genes causing complex diseases.
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Universal Java Matrix Package
sparse and dense matrix, linear algebra, visualization, big data
The Universal Java Matrix Package (UJMP) is an open source Java library which provides sparse and dense matrix classes, as well as a large number of calculations for linear algebra such as matrix multiplication or matrix inverse. Operations such as mean, correlation, standard deviation, replacement of missing values or the calculation of mutual information are supported, too. The Universal Java Matrix Package provides various visualization methods, import and export filters for a large... -
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BEAR
CBR Meets Big Data
Case-based regression learner for big data. The package contains source and binary files for running BEAR's method. BEAR utilizes EAR4 and locality sensitive hashing in its implementation. -
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Relation Tags
Source code for be able to use Relation Tags.
Source code for be able to use Relation Tags. It is part of project VocabularyMem but can be used separately. Relation Tags are tags which can be relationed together . For example tag "Paris" and tag "France" can be relationed with a relation "is part of". This code is created from 0 and is able to define which type of relation we use, using most elemental mathematic properties. It is strongly recommended to read "Relation Tags guide for programmers". Inside source zip, also contains dialogs... -
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Sample Level Musical Timeline
Sample Level Modulation of Musical Timeline
Sample Level Modulation of Musical Timeline Mingfeng Zhang Dept. of Electrical and Computer Engineering, University of Rochester In this toolbox we provide signal processing tools to allocate music events (samples of musical notes) to specified time locations with sample level accuracy. In this implementation, we use computational tools to add in micro-timing variations in J.S. Bach four-part chorales as a "visualizer" for big data. By extracting data patterns from multiple time... -
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PROPER is a package for visual evaluation of ranking classifiers for biological big data mining studies in the mathematical language MATLAB. It is an efficient tool for optimization and comparison of the state-of-the-art ranking classifiers by generating over 20 different high quality two- and three-dimensional performance curves.
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PROPER is a package for visual evaluation of ranking classifiers for biological big data mining studies in the mathematical language MATLAB. It is an efficient tool for optimization and comparison of the state-of-the-art ranking classifiers by generating over 20 different high quality two- and three-dimensional performance curves.
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Chordalysis
Log-linear analysis (data modelling) for high-dimensional data
===== Project moved to https://github.com/fpetitjean/Chordalysis ===== Log-linear analysis is the statistical method used to capture multi-way relationships between variables. However, due to its exponential nature, previous approaches did not allow scale-up to more than a dozen variables. We present here Chordalysis, a log-linear analysis method for big data. Chordalysis exploits recent discoveries in graph theory by representing complex models as compositions of triangular structures,... -
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BIRT Report Designer
Open Source Reporting & Data Visualization Platform
BIRT is an open source technology platform used to create data visualizations and reports that can be embedded into rich client and web applications. Developers who use BIRT Designer are able to access information from multiple data sources easily and quickly in order to create reports and applications with stunning data visualizations. Actuate now provides a free report server, BIRT iHub F-Type, to deploy BIRT content so developers don't have to build their own infrastructure. With a... -
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giServer
giServer the easy to use and extensible batch and integration server
The giServer is an easy-to-use integration server for process automation and event-driven or scheduled execution of batch jobs. Instead of using complex XML configuration files an elaborate GUI for batch job management is included. Some possible usage scenarios are: - Automatic processing of incoming data files - Big Data applications - Process automation - Data Mining/Aggregation applications - Automatic Reporting - Processing and analysis of database records
