Search Results for "read"

Use Apache HBase™ when you need random, realtime read/write access to your Big Data. This project's goal is the hosting of very large tables, billions of rows X millions of columns, atop clusters of commodity hardware. Apache HBase is an open-source, distributed, versioned, non-relational database modeled after Google's Bigtable. A Distributed Storage System for Structured Data by Chang et al.

...This tool allows bioinformatics researchers to efficiently distribute their mapping tasks over the nodes of a cluster by combining a fast multithreaded spliced aligner (HISAT2) with Apache Hadoop, which is a distributed computing framework for scalable Big Data processing. HSRA currently supports single-end and paired-end read alignments from FASTQ/FASTA datasets. Moreover, our tool uses the Hadoop Sequence Parser (HSP) library (link above) to efficiently read the input datasets stored on the Hadoop Distributed File System (HDFS), being able to process datasets compressed with Gzip and BZip2 codecs.