HSRA is a MapReduce-based parallel tool for mapping reads from RNA sequencing (RNA-seq) experiments. RNA-seq analyses typically begin by mapping reads to a reference genome in order to determine the location from which the reads were originated, which is a very time-consuming step. This tool allows bioinformatics researchers to efficiently distribute their mapping tasks over the nodes of a cluster by combining a fast multithreaded spliced aligner (HISAT2) with Apache Hadoop, which is a...
giServer the easy to use and extensible batch and integration server
The giServer is an easy-to-use integration server for process automation and event-driven or scheduled execution of batch jobs.
Instead of using complex XML configuration files an elaborate GUI for batch job management is included.
Some possible usage scenarios are:
- Automatic processing of incoming data files
- Big Data applications
- Process automation
- Data Mining/Aggregation applications
- Automatic Reporting
- Processing and analysis of database records