Search Results for "jpk data processing"

Apache Hudi (pronounced Hoodie) stands for Hadoop Upserts Deletes and Incrementals. Hudi manages the storage of large analytical datasets on DFS (Cloud stores, HDFS or any Hadoop FileSystem compatible storage). Apache Hudi is a transactional data lake platform that brings database and data warehouse capabilities to the data lake. Hudi reimagines slow old-school batch data processing with a powerful new incremental processing framework for low latency minute-level analytics. Hudi provides efficient upserts, by mapping a given hoodie key (record key + partition path) consistently to a file id, via an indexing mechanism. ...

Genie is a completely open source distributed job orchestration engine developed by Netflix. Genie provides REST-ful APIs to run a variety of big data jobs like Hadoop, Pig, Hive, Spark, Presto, Sqoop and more. It also provides APIs for managing the metadata of many distributed processing clusters and the commands and applications which run on them.

Apache InLong is a one-stop integration framework for massive data that provides automatic, secure and reliable data transmission capabilities. InLong supports both batch and stream data processing at the same time, which offers great power to build data analysis, modeling and other real-time applications based on streaming data. InLong (应龙) is a divine beast in Chinese mythology who guides the river into the sea, and it is regarded as a metaphor of the InLong system for reporting data streams. ...

ElasticJob is a distributed scheduling solution consisting of two separate projects, ElasticJob-Lite and ElasticJob-Cloud. ElasticJob-Lite is a lightweight, decentralized solution that provides distributed task sharding services. ElasticJob-Cloud uses Mesos to manage and isolate resources. It uses a unified job API for each project. Developers only need code one time and can deploy at will. Support job sharding and high availability in distributed system. Scale out for throughput and...

The Esri Geometry API for Java can be used to enable spatial data processing in 3rd-party data-processing solutions. Developers of custom MapReduce-based applications for Hadoop can use this API for spatial processing of data in the Hadoop system. The API is also used by the Hive UDF’s and could be used by developers building geometry functions for 3rd-party applications such as Cassandra, HBase, Storm and many other Java-based “big data” applications.

This is an offshoot project of open source data quality (osDQ) project https://sourceforge.net/projects/dataquality/ This sub project will create apache spark based data pipeline where JSON based metadata (file) will be used to run data processing , data pipeline , data quality and data preparation and data modeling features for big data. This uses java API of apache spark.

MarDRe is a de novo MapReduce-based parallel tool to remove duplicate and near-duplicate DNA reads through the clustering of single-end and paired-end sequences from FASTQ/FASTA datasets. This tool allows bioinformatics to avoid the analysis of not necessary reads, reducing the time of subsequent procedures with the dataset. MarDRe is the Big Data counterpart of ParDRe (link above), which employs HPC technologies (i.e., hybrid MPI/multithreading) to reduce runtime on multicore systems. Instead, MarDRe takes advantage of the MapReduce programming model to significantly improve ParDRe performance on distributed systems, especially on cloud-based infrastructures. Written in pure Java to maximize cross-platform compatibility, MarDRe is built upon the open-source Apache Hadoop project, the most popular distributed computing framework for Big Data processing.

...This tool allows bioinformatics researchers to efficiently distribute their mapping tasks over the nodes of a cluster by combining a fast multithreaded spliced aligner (HISAT2) with Apache Hadoop, which is a distributed computing framework for scalable Big Data processing. HSRA currently supports single-end and paired-end read alignments from FASTQ/FASTA datasets. Moreover, our tool uses the Hadoop Sequence Parser (HSP) library (link above) to efficiently read the input datasets stored on the Hadoop Distributed File System (HDFS), being able to process datasets compressed with Gzip and BZip2 codecs.

The giServer is an easy-to-use integration server for process automation and event-driven or scheduled execution of batch jobs. Instead of using complex XML configuration files an elaborate GUI for batch job management is included. Some possible usage scenarios are: - Automatic processing of incoming data files - Big Data applications - Process automation - Data Mining/Aggregation applications - Automatic Reporting - Processing and analysis of database records