Search Results for "parallel"
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Showing 8 open source projects for "parallel"
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XCharts
A charting and data visualization library for Unity
...Visual configuration of parameters, real-time preview of effects, and pure code drawing without additional resources. Support ten built-in charts such as line chart, column chart, pie chart, radar chart, scatter chart, heat map, ring chart, candlestick chart, polar coordinate, parallel coordinate and so on. Supports 3D column charts, funnel charts, pyramids, dashboards, water level charts, pictographic column charts, Gantt charts, rectangular tree charts and other extended charts. Line graphs such as line graphs, curve graphs, area graphs, and stepped line graphs are supported. -
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PANDA
A comprehensive and flexible quantification tool for proteomics data
...On the levels of spectra, peptides and proteins, PANDA works out a few quantitative filters and new scores for quantification confidence. Third, PANDA is designed for processing proteomics big data in parallel. -
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MarDRe
MapReduce-based tool to remove duplicate DNA reads
MarDRe is a de novo MapReduce-based parallel tool to remove duplicate and near-duplicate DNA reads through the clustering of single-end and paired-end sequences from FASTQ/FASTA datasets. This tool allows bioinformatics to avoid the analysis of not necessary reads, reducing the time of subsequent procedures with the dataset. MarDRe is the Big Data counterpart of ParDRe (link above), which employs HPC technologies (i.e., hybrid MPI/multithreading) to reduce runtime on multicore systems. ... -
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HSRA
Hadoop spliced read aligner for RNA-seq data
HSRA is a MapReduce-based parallel tool for mapping reads from RNA sequencing (RNA-seq) experiments. RNA-seq analyses typically begin by mapping reads to a reference genome in order to determine the location from which the reads were originated, which is a very time-consuming step. This tool allows bioinformatics researchers to efficiently distribute their mapping tasks over the nodes of a cluster by combining a fast multithreaded spliced aligner (HISAT2) with Apache Hadoop, which is a distributed computing framework for scalable Big Data processing. ... -
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paralline
Big Data tool
Paralline executes a python function (or lambda function) or a script over each line of huge text files, in parallel processes and aggregates the result to a list. -
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giServer
giServer the easy to use and extensible batch and integration server
The giServer is an easy-to-use integration server for process automation and event-driven or scheduled execution of batch jobs. Instead of using complex XML configuration files an elaborate GUI for batch job management is included. Some possible usage scenarios are: - Automatic processing of incoming data files - Big Data applications - Process automation - Data Mining/Aggregation applications - Automatic Reporting - Processing and analysis of database records -
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Streams for IBM i
Batch performance boosting and Big Data framework for IBM i
Streamd for IBM i is a suite of tools for IBM i (previously known as AS/400 and iSeries) that can significantly improve performance characteristics of batch processes. Due to extensive use of parallel programming techniques Streams for IBM i delivers significant performance improvements for single streamed batch jobs. Streams for IBM i can split an existing batch process into a number of concurrent streams, completely eliminate backup-related delays, introduce new robust recovery policies and even modify the program logic of existing applications - all without any code modifications. ... -
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R Hadoop for Big Data
Download Free Associated R open source script files for big data analy
Download Free Associated R open source script files for big data analysis with Hadoop and R These are R script source file from Ram Venkat from a past Meetup we did at http://www.meetup.com/R-Matlab-Users/events/85160532/ Also, there is a long video and Powerpoint presentation slide PDF with R files at: http://quantlabs.net/blog/2012/11/how-to-use-hadoop-and-r-for-big-data-parallel-processing-free-download-pdf/ Download source files from http://quantlabs.net/blog/2012/11/download-free-associated-r-open-source-script-files-for-big-data-analysis-with-hadoop-and-r-rstats-hadoop/
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