Showing 3 open source projects for "mapping"

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  • 1
    Apache Hudi

    Apache Hudi

    Upserts, Deletes And Incremental Processing on Big Data

    ...Hudi reimagines slow old-school batch data processing with a powerful new incremental processing framework for low latency minute-level analytics. Hudi provides efficient upserts, by mapping a given hoodie key (record key + partition path) consistently to a file id, via an indexing mechanism. This mapping between record key and file group/file id, never changes once the first version of a record has been written to a file. In short, the mapped file group contains all versions of a group of records.
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  • 2

    HSRA

    Hadoop spliced read aligner for RNA-seq data

    HSRA is a MapReduce-based parallel tool for mapping reads from RNA sequencing (RNA-seq) experiments. RNA-seq analyses typically begin by mapping reads to a reference genome in order to determine the location from which the reads were originated, which is a very time-consuming step. This tool allows bioinformatics researchers to efficiently distribute their mapping tasks over the nodes of a cluster by combining a fast multithreaded spliced aligner (HISAT2) with Apache Hadoop, which is a distributed computing framework for scalable Big Data processing. ...
    Downloads: 0 This Week
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  • 3
    Vaex

    Vaex

    Out-of-Core hybrid Apache Arrow/NumPy DataFrame for Python

    ...It calculates statistics such as mean, sum, count, standard deviation etc, on an N-dimensional grid for more than a billion (10^9) samples/rows per second. Visualization is done using histograms, density plots and 3d volume rendering, allowing interactive exploration of big data. Vaex uses memory mapping, zero memory copy policy and lazy computations for best performance (no memory wasted). Cut development cut development time by 80%. Your prototype is your solution. Create automatic pipelines for any model.
    Downloads: 0 This Week
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