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jAudio is a project implementing a number of common feature extraction algorithms for analyzing audio in java. Output is either in Weka's ARFF format or the ACE format. Can be used either as a GUI application, command-line application, or embedded. The primary repository is on github (dmcennis) which pushes to this projects github repository.
NOTE: The library code compatible with audacity has migrated to
https://github.com/claytonotey/libsbsms
A subband sinusoidal modeling library/command line tool/gui for time stretching and pitch scaling audio. Download the sbsms package for the source or the win32/mac wxSBSMSPlayer package for the gui binaries.
DTMF detector library and/or application that reads in the specified audio file and returns/outputs whether DTMF detected and/or list of detected digits. May have GUI and command line interfaces.