A program to model admixture using marker genotype data. Please visit http://homepages.ed.ac.uk/pmckeigu/admixmap/index.html for more information.
ADOL-Py is a python extension to the ADOL-C automatic differentiation library.
Automatic Detection Of Positively Selected Sites
ADOPS is a bioinformatics tool that automatizes the detection of positively selected sites given a set of unaligned nucleotide sequence data. ADOPS implements a complete workflow that integrates three well-known bioinformatic tools: T-Coffee, MrBayes and Codeml (PAML).
An R package for the automated generation of drug safety signals
Adverse Drug event Reporting systems miner
A program which implements Absolutely Dynamic Systems, a proposed mechanism for Artificial Consciousness.
Agents design supporting system for simulation models
Main task is automating the creation of simulation models of complex model. The originalities of proposed software are explicit representation of conceptual model in the concept – attribute – relation form and applying expert system approach to transform designed ontology into agent model. Researchers develop the structure and behavior of agents using declarative approach. Web: https://220.127.116.11/RFFI/Main.php
Aberration detection in tumour exome
Aberration Detection in Tumour Exome (ADTEx) is a tool for copy number variation (CNV) detection for whole-exome data from paired tumour/matched normal samples.
ADTL is an Advanced Data structures Template Library written in C++. it includs sixteen kinds of stl-like contains, such as fibonacci heap,pariring heap,skew heap,avl tree,red-black tree,splay tree,skip list, unrolled linked list and so on.
Converts ADV video frames into FITS files
This is a specialised utility that works with the astronomical digital video (ADV) standard (http://tech.groups.yahoo.com/group/adv-standard/) and converts individual video frames to FITS files. ADV files can be recorded by devices such as the Astronomical Digital Video System (ADVS) - http://www.astrodigitalvideo.com.au/
Open Source and data mining software
ADaMSoft is a free and Open Source Data Mining software developed in Java. It contains data management methods and it can create ready to use reports. It can read data from several sources and it can write the results in different formats.
A MATLAB Automatic Differentiation Tool
ADiGator is a source transformation via operator overloading tool for the automatic differentiation of mathematical functions written in MATLAB. Given a user written file, together with information on the inputs of said file, ADiGator uses forward mode automatic differentiation to generate a new file which contains the calculations required to compute the numeric derivatives of the original user function. Furthermore, these calculations are written entirely in the native MATLAB language, and thus the process may be repeated to obtain nth order derivative files. The package is particularly appealing for applications where the same derivative must be found at multiple different points, i.e. non-linear root finding/optimization, stiff ode integration, etc.
AEM implements a native support for asynchronous events in the Linux kernel. Its aim is to bring carrier-grade characteristics to Linux: scalability and soft real-time responsiveness.
AEPHEM is an astronomical ephemeris and reduction C library. It is compatible with JPL ephemerides. It has routines for the standard astrometric reductions, conversions between different time standards and transformations between coordinate systems.
A package of Rijndael, Twofish and Serpent encryption algorithms implemented in x86 assembly. Meant to learn basics of assembly, learn about the algorithms or to be used in a C program.
A simulation framework for production process modeling in Python
ACP is a simulation framework aimed to production processes modeling. Compared to its ancestor - jES - it is lightweight, more general and written in Python. The basic goal of the simulator is to find bottlenecks in production process which could be hard to detect with traditional approaches (e.g., top-down). In addition, it can be used to speculate about “what-if” scenarios in order to suggest solution strategies.
A simple program to load a set of AFM force indention curves, and then compare the curves and break them into similar groups. Uses a number of different methods to compare the curves to get the best results.
Natural gas and related hydrocarbon compressibility factor calculation
The software can be used to calculate compressibility factor (z factor), molecular weight, density at standard and flowing conditions. It requires pressure, temperature and mole fraction composition of the gas. The algorithm utilized is as per AGA Report Number 8.
AGBStarViewer is a best fit and plotting SW for AGB-star spectra.
AGBStarViewer is an astronomical SW which was developed as a part of my Master Thesis at the University of Vienna. It is designed to compare star spectra and obtain best fits of many hundreds spectra. Licence: GPLv2
R script to run several clustering algorithms using morphometric data
The R script was written to perform and compare several versions of cluster algorithms as described in: Seifert, Ritz & Csősz (2013) published in Myrmecological News. The aim is to identify (cryptic) taxa based on numeric data on morphology. The first step is a Linear Discriminant Analysis (LDA) based on subunits (ant nests) independent of any taxon information. Following analysis are Non-Metric Multidimensional Scaling (NMDS) and k-Means clustering. The NMDS scores are also summarized using K-Means. For comparison, k-Means is also run on the nest means (without preceeding LDA). Cluster assignment is summarized in an output file for all three methods.
This project about providing run-time support for developing Decentralized Autonomic Computing systems (Eclipse Innovation Grand). Currently the project contains a automatic guided vehicle (AGV) simulator and an editor and visualisation as eclipse plugin
AHANNS - Amateur Homemade Artificial Neural Network Simulator
AHANNS enables the user to create and train artificial neural networks. Training is carried out by an implementation of back propagation learning algorithm. See the documentation for details. This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
Distributed AI game server. This software let the user run a server that monitor and control games between AI. The AI and referee can be run by clients on other computers. A web interface will be included for game monitoring.
Do you want a neural network OO class? With documentation? Do not go further... You found it! you have here a complete library of different neural network in an OO encapsulation. Starting from adaline, back propagation, Kohonen
Java Framework for Artificial Intelligence Search Agents algorithms