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What's next of SOAPdenovo2: MEGAHIT is the formal successor of SOAPdenovo2 MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph http://www.ncbi.nlm.nih.gov/pubmed/25609793 https://github.com/voutcn/megahit Latest Code on GitHub: https://github.com/aquaskyline/SOAPdenovo2 SOAPdenovo is a novel short-read assembly method that can build a de novo draft assembly for human-sized genomes. The program is specially designed...

...Included is a design of that architecture, a Java-based simulator, an implementation (without vector instructions) designed as a Logisim circuit (http://ozark.hendrix.edu/~burch/logisim/), and more. The name "Code Red" comes from our team name, the Red Team. Since the competition dictated a small team size, our professor split the class and gave each group a color. We liked the name "Code Red" and chose it to represent our team and school's color (UMass' official color is Maroon.) Only later did we realize that "Code Red" was the name of an unrelated computer worm from 2001.