Showing 3 open source projects for "proteins"

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    AlphaFold 3

    AlphaFold 3

    AlphaFold 3 inference pipeline

    ...This repository provides the complete inference pipeline for running AlphaFold 3, though access to the model parameters is restricted and must be obtained directly from Google under specific terms of use. The system is designed for scientific research applications in structural biology, biochemistry, and bioinformatics, enabling accurate modeling of proteins, ligands, and covalent modifications. Users can perform local predictions via Docker containers, integrating AlphaFold 3’s inference process with provided JSON input configurations. The software includes flexible options for running both data preprocessing and GPU-accelerated inference, allowing users to adapt to available computational resources.
    Downloads: 6 This Week
    Last Update:
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  • 2
    DeeProtGO

    DeeProtGO

    DeeProtGO is a deep learning model for predicting GO terms of proteins

    This project contains the source code of DeeProtGO as well as an example of its use when predicting GO terms of the biological process sub-ontology for eukaryotic proteins.
    Downloads: 0 This Week
    Last Update:
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  • 3
    Cellicone is a project to develop an artificial life organism with the necessary components to make it comparable to biological life as we know it. This includes components ranging from proteins to cells to organs to limbs, and many steps between.
    Downloads: 0 This Week
    Last Update:
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