Search Results for "medical"
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Showing 27 open source projects for "medical"
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OpenClaw Medical Skills
The largest open-source medical AI skills library for OpenClaw
OpenClaw-Medical-Skills is an open-source library that provides a large collection of specialized medical capabilities designed for the OpenClaw AI agent ecosystem. The project organizes domain-specific “skills” that enable autonomous agents to perform tasks related to biomedical research, healthcare analysis, and clinical data interpretation. Each skill is packaged as a modular component that can be integrated into an OpenClaw-based AI assistant, allowing the agent to perform expert-level reasoning and workflows in medical contexts. ... -
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Huatuo-Llama-Med-Chinese
Instruction-tuning LLM with Chinese Medical Knowledge
Huatuo-Llama-Med-Chinese is an open-source project that develops medical-domain large language models by instruction-tuning existing models using Chinese medical knowledge. The project builds specialized models by fine-tuning architectures such as LLaMA, Alpaca-Chinese, and Bloom with curated medical datasets. These datasets are constructed from medical knowledge graphs, academic literature, and question-answer pairs designed to teach models how to respond accurately to healthcare-related queries. ... -
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MedGemma
Collection of Gemma 3 variants that are trained for performance
...The multimodal versions pair a SigLIP-based image encoder pre-trained on diverse de-identified medical imaging data. -
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MING
A large-scale model of medical consultation in Chinese
MING is an open-source medical large language model designed for intelligent medical consultation and question answering in Chinese. The project focuses on building a healthcare-focused conversational system capable of responding to medical questions, analyzing case descriptions, and guiding diagnostic reasoning. It is trained using medical instruction tuning so that the model can understand patient symptoms and respond with structured explanations and clinical suggestions. ... -
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OpenMed
Open source healthcare AI
OpenMed is an open-source healthcare AI and medical NLP toolkit designed to turn clinical text into structured insights using transformer-based models and production-oriented interfaces. Its core purpose is to provide specialized medical entity extraction, PII detection and de-identification, assertion-aware analysis, and related healthcare text processing capabilities without locking users into a proprietary platform. -
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VoxelMorph
Unsupervised Learning for Image Registration
VoxelMorph is an open-source deep learning framework designed for medical image registration, a process that aligns multiple medical scans into a common spatial coordinate system. Traditional image registration techniques typically rely on optimization procedures that must be executed separately for each pair of images, which can be computationally expensive and slow. VoxelMorph approaches the problem using neural networks that learn to predict deformation fields that transform one image so that it aligns with another. ... -
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TorchIO
Medical imaging toolkit for deep learning
...TorchIO is a Python package containing a set of tools to efficiently read, preprocess, sample, augment, and write 3D medical images in deep learning applications written in PyTorch, including intensity and spatial transforms for data augmentation and preprocessing. Transforms include typical computer vision operations such as random affine transformations and also domain-specific ones such as simulation of intensity artifacts due to MRI magnetic field inhomogeneity. -
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MedicalGPT
MedicalGPT: Training Your Own Medical GPT Model with ChatGPT Training
MedicalGPT training medical GPT model with ChatGPT training pipeline, implementation of Pretraining, Supervised Finetuning, Reward Modeling and Reinforcement Learning. MedicalGPT trains large medical models, including secondary pre-training, supervised fine-tuning, reward modeling, and reinforcement learning training. -
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PaperAI
Semantic search and workflows for medical/scientific papers
PaperAI is an open-source framework for searching and analyzing scientific papers, particularly useful for researchers looking to extract insights from large-scale document collections. -
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SciSpaCy
A full spaCy pipeline and models for scientific/biomedical documents
ScispaCy is a spaCy extension optimized for processing biomedical and scientific text, providing domain-specific NLP models for tasks like named entity recognition (NER) and dependency parsing. -
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Claude Scientific Skills
A set of ready to use Agent Skills for research, science, engineering
Claude Scientific Skills is a large open source collection of ready-to-use scientific capabilities that extend AI coding agents into full research assistants. The project provides more than 170 curated skills covering domains such as genomics, drug discovery, medical imaging, physics, and advanced data analysis. Each skill bundles documentation, examples, and tool integrations so agents can reliably execute complex multi-step scientific workflows. The framework follows the open Agent Skills standard and works with multiple AI development environments including Claude Code, Cursor, and Codex. ... -
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MONAI
AI Toolkit for Healthcare Imaging
...It is built on top of PyTorch and is released under the Apache 2.0 license. Aiming to capture best practices of AI development for healthcare researchers, with an immediate focus on medical imaging. Providing user-comprehensible error messages and easy to program API interfaces. Provides reproducibility of research experiments for comparisons against state-of-the-art implementations. -
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TAME LLM
Traditional Mandarin LLMs for Taiwan
TAME LLM is an open-source initiative focused on building and releasing large language models optimized for Traditional Mandarin and the linguistic context of Taiwan. The project includes models such as Llama-3-Taiwan-70B, which are fine-tuned versions of large transformer architectures trained on extensive corpora containing both Traditional Mandarin and English text. These models are designed to support applications such as conversational AI, knowledge retrieval, and domain-specific... -
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Albumentations
Fast image augmentation library and an easy-to-use wrapper
...Albumentations supports different computer vision tasks such as classification, semantic segmentation, instance segmentation, object detection, and pose estimation. Albumentations works well with data from different domains: photos, medical images, satellite imagery, manufacturing and industrial applications, Generative Adversarial Networks. Albumentations can work with various deep learning frameworks such as PyTorch and Keras. -
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SMILI
Scientific Visualisation Made Easy
The Simple Medical Imaging Library Interface (SMILI), pronounced 'smilie', is an open-source, light-weight and easy-to-use medical imaging viewer and library for all major operating systems. The main sMILX application features for viewing n-D images, vector images, DICOMs, anonymizing, shape analysis and models/surfaces with easy drag and drop functions. -
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Doctor Dignity
Doctor Dignity is an LLM that can pass the US Medical Licensing Exam
...The code is designed to be hackable rather than production-grade, giving learners a chance to experiment with NLP flows and lightweight back-end components. It also highlights privacy-aware patterns and cautions that this kind of software must not replace licensed medical advice. As a teaching and ideation vehicle, the project invites contributors to iterate on intent classification, response templates, and safe-use boundaries. -
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ThoughtSource
A central, open resource for data and tools
ThoughtSource is a central, open resource and community centered on data and tools for chain-of-thought reasoning in large language models (Wei 2022). Our long-term goal is to enable trustworthy and robust reasoning in advanced AI systems for driving scientific research and medical practice. -
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OmicSelector
Feature selection and deep learning modeling for omic biomarker study
OmicSelector is an environment, Docker-based web application, and R package for biomarker signature selection (feature selection) from high-throughput experiments and others. It was initially developed for miRNA-seq (small RNA, smRNA-seq; hence the name was miRNAselector), RNA-seq and qPCR, but can be applied for every problem where numeric features should be selected to counteract overfitting of the models. Using our tool, you can choose features, like miRNAs, with the most significant... -
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MITRE Annotation Toolkit
A toolkit for managing and manipulating text annotations
...MAT supports both UI interaction and command-line interaction, and provides various levels of control over the overall annotation process. It can be customized for specific tasks (e.g., named entity identification, de-identification of medical records). The goal of MAT is not to help you configure your training engine (in the default case, the Carafe CRF system) to achieve the best possible performance on your data. MAT is for "everything else": all the tools you end up wishing you had. -
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NiftyNet
An open-source convolutional neural networks platform for research
An open-source convolutional neural networks platform for medical image analysis and image-guided therapy. NiftyNet is a TensorFlow-based open-source convolutional neural networks (CNNs) platform for research in medical image analysis and image-guided therapy. NiftyNet’s modular structure is designed for sharing networks and pre-trained models. Using this modular structure you can get started with established pre-trained networks using built-in tools. -
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Safe Harbor Deidentification
Safe Harbor Deidentification for medical documents
Phalanx - Deidentify Safe Harbor Deidentification Mode of Phalanx is an abridged pipeline of NLP annotators culminating in NER annotators which write output of text offsets. It uses the Safe Harbor deidentification method. -
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DIGITS
Deep Learning GPU training system
The NVIDIA Deep Learning GPU Training System (DIGITS) puts the power of deep learning into the hands of engineers and data scientists. DIGITS can be used to rapidly train the highly accurate deep neural network (DNNs) for image classification, segmentation and object detection tasks. DIGITS simplifies common deep learning tasks such as managing data, designing and training neural networks on multi-GPU systems, monitoring performance in real-time with advanced visualizations, and selecting... -
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Febrl (Freely Extensible Biomedical Record Linkage) does data standardisation (segmentation and cleaning) and probabilistic record linkage ("fuzzy" matching) of one or more files or data sources which do not share a unique record key or identifier.
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PyBact is an open source software written in Python for Bacterial Identification. The software generates simulated data matrix which accurately represents the probabilistic positive/negative results of the tested biochemical test.
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Naimath (syn. blessing) is a project to create tools for diagnosis, management of clinical cases in the form of Rule based Medical Expert System integrating Interactive Health education, Semantified EMR, and serve as a learning tool for students. Website seen at www.naimath.com
