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Showing 38 open source projects for "data"
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Armadillo
fast C++ library for linear algebra & scientific computing
* Fast C++ library for linear algebra (matrix maths) and scientific computing * Easy to use functions and syntax, deliberately similar to Matlab / Octave * Uses template meta-programming techniques to increase efficiency * Provides user-friendly wrappers for OpenBLAS, Intel MKL, LAPACK, ATLAS, ARPACK, SuperLU and FFTW libraries * Useful for machine learning, pattern recognition, signal processing, bioinformatics, statistics, finance, etc. * Downloads:... -
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Eventer
Rapid, unbiased, reproducible analysis of synaptic events
...The software combines deconvolution for detection, and variable length template matching approaches for screening out false positive events. Eventer also includes a machine learning-based approach allowing users to train a model to implement their ‘expert’ selection criteria across data sets without bias. Sharing models allows users to implement consistent analysis procedures. The software is coded in MATLAB, but has been compiled as standalone applications for Windows, Mac and Linux. Please visit the official Eventer website for more info https://eventerneuro.netlify.app/ While the paper is in preparation, please cite as; Winchester, G., Liu, S., Steele, O.G., Aziz, W. and Penn, A.C. (2020) Eventer. ... -
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mTRF-Toolbox
A MATLAB package for modelling multivariate stimulus-response data
mTRF-Toolbox is a MATLAB package for modelling multivariate stimulus-response data, suitable for neurophysiological data such as MEG, EEG, sEEG, ECoG and EMG. It can be used to model the functional relationship between neuronal populations and dynamic sensory inputs such as natural scenes and sounds, or build neural decoders for reconstructing stimulus features and developing real-time applications such as brain-computer interfaces (BCIs). -
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CometAnalyser
CometAnalyser, for quantitative comet assay analysis.
Description: Comet assay provides an easy solution to estimate DNA damage in single cells through microscopy assessment. To obtain reproducible and reliable quantitative data, we developed an easy-to-use tool named CometAnalyser. CometAnalyser is an open-source deep-learning tool designed for the analysis of both fluorescent and silver-stained wide-field microscopy images. Once the comets are segmented and classified, several intensity/morphological features are automatically exported as a spreadsheet file. ... -
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This Matlab code is used for demonstration of the effect of CDF-TS as a preprocessing method to transform data. Written by Ye Zhu, Deakin University, April 2021, version 1.0. This software is under GNU General Public License version 3.0 (GPLv3) This code is a demo of method described by the following publication: Zhu, Y., Ting, K.M., Carman, M. and Angelova, M., 2021, April. CDF Transform-and-Shift: An effective way to deal with datasets of inhomogeneous cluster densities. ...
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Isolation Similarity
aNNE similarity based on Isolation Kernel
Demo of using aNNE similarity for DBSCAN. Written by Xiaoyu Qin, Monash University, March 2019, version 1.0 This software is under GNU General Public License version 3.0 (GPLv3) This code is a demo of method described by the following publication: Qin, X., Ting, K.M., Zhu, Y. and Lee, V.C., 2019, July. Nearest-neighbour-induced isolation similarity and its impact on density-based clustering. In Proceedings of the AAAI Conference on Artificial Intelligence (Vol. 33, pp.... -
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Machine Learning Homework
Matlab Coding homework for Machine Learning
The Machine-Learning-homework repository by user “Ayatans” is a collection of MATLAB code intended to solve or illustrate assignments in machine learning courses. It includes implementations of standard machine learning algorithms (such as regression, classification, etc.), scripts for data loading and preprocessing, and evaluation routines (e.g. accuracy, error metrics). Because it is structured as homework or practice material, the code is likely intended more for didactic use than for production deployment. It may contain comments, example datasets, and perhaps test scripts. The repository does not seem to be heavily maintained as a software project; rather, it functions as a library of solved problems and educational examples. ... -
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Phenalysis
Analyze agronomic plant research plots in aerial orthomosaic images.
A graphical user interface to import, analyze and export plots from orthomosaic images of agronomic trials. Please cite the following reference in your work if you use Phenalysis: Khan Z and Miklavcic SJ (2019) An Automatic Field Plot Extraction Method From Aerial Orthomosaic Images. Front. Plant Sci. 10:683. doi: https://doi.org/10.3389/fpls.2019.00683 This tool is being developed through the sponsorship of the Australian Research Council's Industrial Transformation Research Hub on... -
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OpenFace
A state-of-the-art facial behavior analysis toolkit
OpenFace is an advanced facial behavior analysis toolkit intended for computer vision and machine learning researchers, those in the affective computing community, and those who are simply interested in creating interactive applications based on facial behavior analysis. The OpenFace toolkit is capable of performing several complex facial analysis tasks, including facial landmark detection, eye-gaze estimation, head pose estimation and facial action unit recognition. OpenFace is able to... -
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CFNet
Training a Correlation Filter end-to-end allows lightweight networks
...The framework combines correlation filters with deep convolutional neural networks to create an efficient and accurate visual object tracker. Unlike traditional correlation filter trackers that rely on hand-crafted features, CFNet learns feature representations directly from data in an end-to-end fashion. This allows the tracker to be both computationally efficient and robust to appearance changes such as scale, rotation, and illumination variations. The repository provides pre-trained models, training code, and testing scripts for evaluating the tracker on standard benchmarks. By bridging the gap between correlation filters and deep learning, CFNet provides a foundation for further research in real-time object tracking. -
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MatlabFunc
Matlab codes for feature learning
...The repository brings together a wide range of utility scripts, algorithms, and implementations that serve as building blocks for research and development. These functions cover areas such as matrix operations, optimization, data processing, and visualization, making them broadly applicable across different research domains. The project is intended to provide reusable and adaptable MATLAB code that can save time for researchers and students working on experimental or applied projects. By consolidating these tools in one place, MatlabFunc serves as a practical reference and toolkit for both academic and engineering purposes. ... -
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BioRec:Bird Census field data annotation
Recognizing biological data from a notebook.
This project helps to digitize field data for a certain Bird Census method. Namely, bird census based on personal inspection or small (~10 km^2) regions with recording birds' position and behaviour on paper. This project makes it easy to annotate such field data and to make this data available for statistical analysis. -
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This project aims to develop and share fast frequent subgraph mining and graph learning algorithms. Currently we release the frequent subgraph mining package FFSM and later we will include new functions for graph regression and classification package
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Deep Photo Style Transfer
Code and data for paper "Deep Photo Style Transfer"
Deep Photo Style Transfer is an implementation of the algorithm described in the paper “Deep Photo Style Transfer” (arXiv 1703.07511). The software allows users to transfer the style of one photograph to another while preserving photorealism and semantic consistency. It relies on semantic segmentation masks to guide style transfer (so that e.g. sky maps to sky, building maps to building), and uses a matting Laplacian regularization term to ensure smooth transitions. The repository provides... -
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EEG Seizure Prediction
Seizure prediction from EEG data using machine learning
The Kaggle-EEG project is a machine learning solution developed for seizure prediction from EEG data, achieving 3rd place in the Kaggle/University of Melbourne Seizure Prediction competition. The repository processes EEG data to predict seizures by training machine learning models, specifically using SVM (Support Vector Machine) and RUS Boosted Tree ensemble models. The framework processes EEG data into features, trains models, and outputs predictions, handling temporal data to ensure accuracy. -
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mctc4bmi
Matrix and Tensor Completion for Background Model Initialization
MCTC4BMI (Multimodal Compressed Sensing and Tensor Decomposition for Brain-Machine Interfaces) is a MATLAB toolbox designed to process and analyze EEG data. It applies compressed sensing and tensor decomposition techniques to improve brain-machine interface (BMI) performance. -
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All future developments will be implemented in the new MATLAB toolbox SciXMiner, please visit https://sourceforge.net/projects/scixminer/ to download the newest version. The former Matlab toolbox Gait-CAD was designed for the visualization and analysis of time series and features with a special focus to data mining problems including classification, regression, and clustering.
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Mass-based dissimilarity
A data dependent dissimilarity measure based on mass estimation.
This software calculates the mass-based dissimilarity matrix for data mining algorithms relying on a distance measure. References: Overcoming Key Weaknesses of Distance-based Neighbourhood Methods using a Data Dependent Dissimilarity Measure. KDD 2016 http://dx.doi.org/10.1145/2939672.2939779 The source code, presentation slide and poster are attached under "Files". The presentation video in KDD 2016 is published on https://youtu.be/eotD_-SuEoo . -
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BPL
Bayesian Program Learning model for one-shot learning
BPL (Bayesian Program Learning) is a MATLAB implementation of the Bayesian Program Learning framework for one-shot concept learning (especially on handwritten characters). The approach treats each concept (e.g. a character) as being generated by a probabilistic program (motor primitives, strokes, spatial relationships), and inference proceeds by fitting those generative programs to a single example, generalizing to new examples, and generating new exemplars. The repository contains code for... -
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DeepLearnToolbox
Matlab/Octave toolbox for deep learning
DeepLearnToolbox is a MATLAB / Octave toolbox for prototyping deep learning models. It provides implementations of feedforward neural networks, convolutional neural networks (CNNs), deep belief networks (DBNs), stacked autoencoders, convolutional autoencoders, and more. The toolbox includes example scripts for each method, enabling users to quickly experiment with architectures, training, and inference workflows. Although it's been flagged as deprecated and no longer actively maintained, it... -
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This site contains four packages of Mass and mass-based density estimation. 1. The first package is about the basic mass estimation (including one-dimensional mass estimation and Half-Space Tree based multi-dimensional mass estimation). This packages contains the necessary codes to run on MATLAB. 2. The second package includes source and object files of DEMass-DBSCAN to be used with the WEKA system. 3. The third package DEMassBayes includes the source and object files of a Bayesian...
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JAABA
The Janelia Automated Animal Behavior Annotator
...JAABA uses machine learning techniques to convert these manual labels into behavior detectors that can then be used to automatically classify the behaviors of animals in large data sets with high throughput. JAABA combines an intuitive graphical user interface, a fast and powerful machine learning algorithm, and visualizations of the classifier into an interactive, usable system for creating automatic behavior detectors. Documentation is available at: http://jaaba.sourceforge.net/ -
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Matlab Community Detection Toolbox
CDTB is a MATLAB toolbox which performs Community Detection
...The user can employ the functions from the MATLAB command line; or he can write his own code, incorporating the CDTB functions; or he can use the Graphical User Interface (GUI) which automates the community detection and includes some data visualization options. -
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Fish4Knowledge Project
Analysis of undersea fish videos
The Fish4knowledge project investigated: information abstraction and storage methods for analyzing undersea video data (from 10E+15 pixels to 10E+12 units of information), machine and human vocabularies for detecting & describing fish, flexible process architectures to process the data and scientific queries and effective specialised user query interfaces. A combination of computer vision, database storage, workflow and human computer interaction methods were used to achieve this. ... -
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mVision library is a set of functions related with computer vision programmed in Matlab. Also include a couple of GUIs for test visually the functions.
