Showing 6 open source projects for "genomics"

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    MedgeClaw

    MedgeClaw

    Open-source AI research assistant for biomedicine

    MedgeClaw is a specialized AI-powered research assistant tailored for biomedical and scientific workflows, built on top of OpenClaw and Claude Code architectures. It integrates a large library of domain-specific skills, enabling it to perform complex analyses in areas such as genomics, drug discovery, and clinical research. The system connects conversational interfaces with computational environments, allowing users to initiate research tasks through messaging platforms while the backend executes analyses using tools like R and Python. It includes a real-time dashboard that displays progress, generated code, and outputs, providing transparency throughout the research process. ...
    Downloads: 7 This Week
    Last Update:
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  • 2
    Scientific Agent Skills

    Scientific Agent Skills

    A set of ready to use Agent Skills for research, science, engineering

    ...It supports any AI agent compatible with the Agent Skills standard, including tools such as Cursor, Claude Code, Codex, and Gemini CLI. The repository includes 135 skills across scientific domains such as genomics, cheminformatics, clinical research, medical imaging, machine learning, physics, materials science, geospatial analysis, and scientific writing. Each skill provides curated documentation, examples, best practices, and integration guidance so agents can execute complex workflows more reliably. It is especially useful for researchers who need AI assistance with databases, Python libraries, literature review, data analysis, and scientific communication. ...
    Downloads: 10 This Week
    Last Update:
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  • 3
    Claude Scientific Skills

    Claude Scientific Skills

    A set of ready to use Agent Skills for research, science, engineering

    Claude Scientific Skills is a large open source collection of ready-to-use scientific capabilities that extend AI coding agents into full research assistants. The project provides more than 170 curated skills covering domains such as genomics, drug discovery, medical imaging, physics, and advanced data analysis. Each skill bundles documentation, examples, and tool integrations so agents can reliably execute complex multi-step scientific workflows. The framework follows the open Agent Skills standard and works with multiple AI development environments including Claude Code, Cursor, and Codex. ...
    Downloads: 4 This Week
    Last Update:
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  • 4
    The Deep Review

    The Deep Review

    A collaboratively written review paper on deep learning, genomics, etc

    This repository is home to the Deep Review, a review article on deep learning in precision medicine. The Deep Review is collaboratively written on GitHub using a tool called Manubot (see below). The project operates on an open contribution model, welcoming contributions from anyone. To see what's incoming, check the open pull requests. For project discussion and planning see the Issues. As of writing, we are aiming to publish an update of the deep review. We will continue to make project...
    Downloads: 0 This Week
    Last Update:
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  • 5
    TreeLiker

    TreeLiker

    TreeLiker is a collection of fast algorithms for working with complex

    ...In experiments with real-life data, the algorithms were shown to be able to construct complete non-redundant sets of patterns for chemical datasets involving several thousands of molecules as well as for comparably large datasets from genomics or proteomics. The included relational learning algorithms are tailored towards so-called tree-like features for which some otherwise very hard sub-problems (NP-hard) become tractable.
    Downloads: 0 This Week
    Last Update:
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  • 6
    The Comparative Genomics Ontology (CGO) is an OWL ontology initially developed to support the integration of comparative genomics data from heterogeneous resources as part of the ComparaGRID project.
    Downloads: 0 This Week
    Last Update:
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