Exact Subgraph Matching Algorithm for Dependency Graphs
...We have demonstrated the successful usage of our algorithm in three biomedical relation and event extraction applications: BioNLP 2011 shared tasks on event extraction, Protein-Residue association detection and Protein-Protein interaction identification.
This Java implementation implements our ESM algorithm. See README file: https://sourceforge.net/projects/esmalgorithm/files/
If you use our ESM implementation to support academic research, please cite the following paper:
Haibin Liu, Vlado Keselj, and Christian Blouin. ...
...Double Layered Learning for Biological Event Extraction from Text. In Proceedings of the BioNLP 2011 Workshop Companion Volume for Shared Task, Portland, Oregon, June. Association for Computational Linguistic