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DRAMMS is a software package designed for 2D-to-2D and 3D-to-3D deformable medical image registration tasks. Released by Section of Biomedical Image Analysis (SBIA) at the University of Pennsylvania. Some typical applications of DRAMMS include, -- Cross-subject registration of the same organ (can be brain, breast, cardiac, etc); -- Mono- and Multi-modality registration (MRI, CT, histology); -- Longitudinal registration (pediatric brain growth, cancer development, mouse...

We present BudgetedSVM, a C++ toolbox containing highly optimized implementations of three recently proposed algorithms for scalable training of Support Vector Machine (SVM) approximators: Adaptive Multi-hyperplane Machines (AMM), Budgeted Stochastic Gradient Descent (BSGD), and Low-rank Linearization SVM (LLSVM). BudgetedSVM trains models with accuracy comparable to LibSVM in time comparable to LibLinear, as it allows solving highly non-linear classification problems with millions of...

This is a collection of some matrix algorithms like matrix inverse, LU decomposition, Gauss elimination, matrix multiplication, matrix pow, matrix add, matrix subtract etc. This package also contains debugging information for the above algorithms

quadGT is a software package for the joint genotyping of two parents, child’s normal genome and child’s tumor genome based on sequencing reads aligned to a reference genome.

FREE Download Open Source Code Simple Test of Microsoft .NET C# using MATLAB NE Builder Toolbox This is a simple demo of this powerful Matlab toolbox with some M script algo examples Download the ZIP package from http://quantlabs.net/blog/2012/11/free-download-open-source-code-simple-test-of-microsoft-net-c-using-matlab-ne-builder-toolbox-matlab-csharp/

jsGorithm is a Javascript algorithm execution viewer that can be used as an educative tool for introductory courses on programming and algorithmics, with programs written in a subset of C/C++/Javascript. It can be used for teaching and learning.

This is a series of *.java Classes for making programming tasks simpler, much like Apache Commons. Included in this src package is an Advanced Randomizer, TStringList Clone From Delphi, an Algorithem Class, and Method MultiTask Better than Runnables.

breve is a free, open-source 3D multi-agent simulation package designed for simulating decentralized systems and artificial life.

An R package implementation of a consensus clustering methodology. This package allows users to perform re-sampling statistics based clustering using multiple clustering algorithms to assess the robustness of both clusters and members of clusters.

An R package for detailed inspection and analysis of LCMS data. An R package developed by Sukhdeep Singh at Department of Surgery and Cancer, Imperial College London,UK.

The JSparse Matrix Package, developed by Philipp Geigenmüller during an internship at the prudsys AG in Chemnitz, Germany, is an extension of the well-known Java Matrix Package (JAMA) and allows the use of sparse matrices and related algorithms.

Fast search using a standard SQL on Oracle or PostgreSQL database. The package includes the database creator, loader and web application. It supports SMILES and SMARTS substructure searches, similarity search, stereochemistry.

A fully functional red-black tree implemented in C++/CLI with an OO approach of naming and structuring which makes the code highly readable as well as easily portable to C# or Java. The package also includes a binary search tree and two traversal algorithms.

This library is a lightweight implementation of genetic algorithm, contains the most popular types of chromosomes and the basic algorithms for selection, elitism, crossing and mutation.

The package edmonds-alg contains a C++-implementation of Edmonds's optimum branching algorithm as described by Tarjan in 1977.

A Java package for pretty-printing a text by deciding where to introduce line-breaks and indentation. A Java implementation of Derek Oppen\'s pretty printing algorithm. It is _not_ a pretty printer for Java code, though it could be used to write one.

This small C package is made of an independent AVL tree library, and of an extension module for Python that builds upon it to provide objects of type 'avl_tree' in Python, which can behave as sorted containers or sequential lists.

compactpath is a python package to handle compacting of filepaths. compacting of filepaths may be useful in gui programming where filepaths of arbitrary lenght have to be displayed in widgets with limited visual space.

A package of Rijndael, Twofish and Serpent encryption algorithms implemented in x86 assembly. Meant to learn basics of assembly, learn about the algorithms or to be used in a C program.