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NeoBio is a Java class library of Computational Biology Algorithms. The current version consists mainly of pairwise sequence alignment algorithms such as the classical dynamic programming methods of Needleman-Wunsch and Smith-Waterman.
The aim is to develop a foundation for a FPGA hardware platform able to run Linux kernel and software. It must be easy to add hardware accelerated ip-cores to the FPGA. Ethernet and TCP/IP is a corner stone of the hardware and software.
Attempt to create a PHP-framework: component-oriented; with global DI-container; for micro-services and also for big module-builded projects; with its own ORM. Little demo: http://complex.php.gi.igor-gilman.de.
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A powerful hashing library with features like dynamic bucketsize adjustments, thread safety, generic interface, rbtree bucket storage and a bundle of hashing algorithms.
This is a library for an extensible framework for range encoding. The framework is an extensible object-based state machine where probabilities are chosen based on the current frame the machine is in.
The SBMLevolver is an evolutionary algorithm package that creates SBML models with user-specified properties and behaviour from a given set of building blocks. Applications lie in network reconstruction and synthetic biology.
Weka++ is a collection of machine learning and data mining algorithm implementations ported from Weka (http://www.cs.waikato.ac.nz/ml/weka/) from Java to C++, with enhancements for usability as embedded components.
Application to automatically merge gedcom files. It provides either a user or another program the ability to merge gedcom files with as little human interaction as possible and with high quality of matching results.
This projects implements various optimization heuristics and meta-heuristics (such as local search, VND, GRASP, Simulated Annealing, and more still to come) finding solutions on the post enrolment course timetabling problem.
Generic engine to filter information.
We wish to show that the power of expression of a filter makes it possible to appreciably reduce the size of the code necessary to extract information and that it is possible in Python.
This project aim to provide a crowd movement simulation based on primitive human behaviours and emerging behaviours for research and educational purposes. The application (front-end) is generic and can be reused.
It's an implementation of the A* algorithm together with a grid processor which pre-processes 8-bit bpm graphic files using a variable resolution and an SDL user interface to test it.
Web-Service for discrete dynamic systems' model description and simulation. Firstly, recursive procedures of stochastic optimization are added. The framework for open and closed loop model description and simulation.
Procedural content generation of deterministic and complex entities, with properties and other entities inside, defined by an editable XML file, along with a framework to simulate actions, compositions, and interactions of entities.