Showing 40 open source projects for "research"

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  • 1
    Gemi

    Gemi

    PCR primers / probes design from multiple & degenerate sequences

    Please, do not hesitate to contact us if you need help. https://sites.google.com/view/hsa23/ Gemi, an automated, fast, and easy-to-use bioinformatics tool with a user-friendly interface to design primers and probes for polymerase chain reaction (PCR). Gemi accepts multiple aligned and long DNA and RNA sequences with degenerate nucleotide (non-A/C/G/T bases). Gemi can be used for quantitative, real-time and conventional PCR (qPCR, rt-PCR, etc.), and Sanger sequencing. Gemi can parse large...
    Downloads: 7 This Week
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  • 2
    To give users the full control over the running application. This means that an application is working according to its purpose but the control over the whole interface is taken from developer and given to users. While an application is running, users can move, resize, and tune all the screen objects through which the communication with an application is going. Set of files includes the book (both in DOC and PDF formats), a big demonstration project with all its files available (all the...
    Downloads: 0 This Week
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  • 3
    PANDA

    PANDA

    A comprehensive and flexible quantification tool for proteomics data

    PANDA is a comprehensive and flexib tool for quantitative proteomics data analysis, which is developed based on our solid foundations in quantitative proteomics for years. Several novelties have been implemented in it. First, we implement the advantage algorithms of LFQuant (Proteomics 2012, 12, (23-24), 3475-84) and SILVER (Bioinformatics 2014, 30, (4), 586-7) into PANDA. Second, we consider the state-of-art concept of quantification reliability in this quantitative workflow. On the levels...
    Downloads: 8 This Week
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  • 4

    PythagorasTheoremGeneralizer

    Pythagoras Theorem Generalizer

    An attempt to discover new kinds of Fractals by generalizing Pythagoras's Theorem into higher dimensions and negative numbers. Pythagoras Theorem when a < 0.0 and b >= 0.0 : c^2 = a^2 + b^2 * (((a*a + b*b)^0.5 - b)^2.0/(b - (a*a + b*b)^0.5)^2.0) c^2 = a^2 + b^2 * (((a*a + b*b)^0.5 - b)^2.0/(b - (a*a + b*b)^0.5)^2.0) * 1.0 c^2 = a^2 + b^2 * (((a*a + b*b)^0.5 - b)^2.0/(b - (a*a + b*b)^0.5)^2.0) * (-1.0 / -1.0) c^2 = a^2 + b^2 * (((((a*a + b*b)^0.5)*i - b*i)^2.0)/(b*i - (((a*a +...
    Downloads: 0 This Week
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  • 5
    Weight Vectors

    Weight Vectors

    Generate Weight Vectors for multi-objective optimization algorithms

    A handy tool with graphical interface that generate weight vectors for multi-objective optimization algorithms. source: https://github.com/ahmed-fathy/weight-vectors
    Downloads: 0 This Week
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  • 6
    Pack-Print-Cut

    Pack-Print-Cut

    Packing two dimensional rectangular elements at orthogonal table

    Program was created for optimized packing of two dimensional rectangular elements at orthogonal table with main purpose of printing cutting sheets that can be used for cutting material at production in wood and panel furniture manufacturing. It is developed upon authors several years of experience at woodworking, and actual carpenters needs when such software is in question. In spite its look it is fully functional peace of software , with all necessary elements needed for generating...
    Downloads: 0 This Week
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  • 7
    Linear Program Solver (Simplex)
    Linear Program Solver (Solvexo) is an optimization package intended for solving linear programming problems. The main features of the Solvexo are: · Solvexo solver is based on the efficient implementation of the simplex method (one or two phases); · Solvexo provides not only an answer, but a detailed solution process as a sequence of simplex matrices, so you can use it in studying (teaching) linear programming. · Solvexo provides a solution with the graphic method for problems with...
    Downloads: 2 This Week
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  • 8
    CognitionMaster

    CognitionMaster

    object-based image analysis framework

    Wienert S, Heim D, Kotani M, Lindequist B, Stenzinger A, Ishii M, Hufnagl P, Beil M, Dietel M, Denkert C, Klauschen F. CognitionMaster: an object-based image analysis framework. Diagn Pathol 2013, 8:34
    Downloads: 1 This Week
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  • 9

    Secciones

    Software for calculating geometric properties of cross sections

    Software for calculating geometric properties of cross sections and polygons. Calculates: area, moments of inertia, product of inertia, radius of gyration, section modulus, among others. It also supports import and export of CSV, JSON and DXF files. Able to do geometric transformations and 2D and 3D visualization of the cross sections.
    Downloads: 3 This Week
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  • 10

    HH-Evolver

    A framework for domain-specific, hyper-heuristic evolution

    HH-Evolver is a framework for domain-specific, hyper-heuristic evolution. HH-Evolver automates the design of domain-specific heuristics for planning domains. Hyper-heuristics generated by our tool can then be used with combinatorial search algorithms such as A* and IDA* for solving problems of the given domain.
    Downloads: 0 This Week
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  • 11
    Technical analysis library with indicators like ADX, MACD, RSI, Stochastic, TRIX... includes also candlestick pattern recognition. Useful for trading application developpers using either Excel, .NET, Mono, Java, Perl or C/C++.
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    Downloads: 8,967 This Week
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  • 12
    Analytic Toolkit
    The purpose of the project is summarising effort from a number of analytic libraries, adding interactive web-based user interface and making a free open source solution for risk analytics and stress testing. Feb 8, 2012 Paul Glasserman's Importance Sampling and Tail Approximations as well as plain Monte Carlo have been implemented for for the widely used normal copula model of portfolio credit risk. The package includes source code, examples, spreadsheet with results and references to the papers.
    Downloads: 0 This Week
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  • 13
    OsmSharp

    OsmSharp

    OsmSharp - OpenStreetMap (OSM) Library and Tools developed in C#

    *** this project has moved to codeplex: http://osmsharp.codeplex.com/ ***
    Downloads: 0 This Week
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  • 14
    SVM# is a svm(support vector machine) classification implemented in C#. The project contains both train and predict modules.
    Downloads: 0 This Week
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  • 15
    Ertha is an open source GIS whose main focus is to guarantee easy extensibility and straightforward integration of custom modules. It provides basic geographic rendering and topologic analysis and exposes the main data structures loaded from shapefiles.
    Downloads: 0 This Week
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  • 16
    Discrete Mathematics task solutioner. (The Theory For Scheduling / Network Graphs) Contains C++ mathematic algorithms and C# GUI.
    Downloads: 0 This Week
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  • 17
    Use, study and develop advanced digital halftoning algorithms with Halftone Laboratory, a GIMP plug-in backed by a highly modular and extensible library. It uses .NET/Mono and GIMP#.
    Downloads: 1 This Week
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  • 18
    This project aims to implement several network fault diagnosis algorithms.
    Downloads: 0 This Week
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  • 19
    "Blue Planet" is a research project simulating the behaviour and darwinian evolution of unicellular lifeforms, each controlled by its own genetic program. Moreover, "Blue Planet Inhabitants" are suited for swarm intelligence and swarm research.
    Downloads: 0 This Week
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  • 20
    A .net implementation of a framework for genetic algorithms. This tool enables programmers to write the "core" of their problem and have a genetic algorithm immediately setup for solving it.
    Downloads: 0 This Week
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  • 21
    Alternative approach to minimum redundancy coding (fixed-length) without using tree data structures. The main advantages are simplicity and flexibility.
    Downloads: 0 This Week
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  • 22
    GEP is an evolutionary algorithm for function finding. This framework is a powerful way of expressing and coding genetic-like structures and quickly finding solutions through evolution by common genetic operators.
    Downloads: 0 This Week
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  • 23
    ‘intelliworm’ is a prototype simulation of a Intelligent Species of a common earth worm,which inherits human like decision making capabilities through Neural Network intelligence representation,all developed by integrating .NET with Lisp and Yacc.
    Downloads: 0 This Week
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  • 24
    Classic game solved with MinMax algorithm (full solution tree) and simple Heuristics. Specially for learning and teaching computer AI
    Downloads: 0 This Week
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  • 25
    This project uses massively parallel Graphics Processing Units(GPU) for neural network(Backpropagation) purposes.
    Downloads: 0 This Week
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