Showing 28 open source projects for "nucleus"

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  • 1
    awesome-single-cell

    awesome-single-cell

    Community-curated list of software packages and data resources

    ...List of software packages (and the people developing these methods) for single-cell data analysis, including RNA-seq, ATAC-seq, etc. Rapid, accurate and memory-frugal preprocessing of single-cell and single-nucleus RNA-seq data. Find bimodal, unimodal, and multimodal features in your data. Ascend is an R package comprised of fast, streamlined analysis functions optimized to address the statistical challenges of single cell RNA-seq. The package incorporates novel and established methods to provide a flexible framework to perform filtering, quality control, normalization, dimension reduction, clustering, differential expression and a wide-range of plotting. ...
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  • 2

    WRVM

    A weakly reversible Forth for Linux (Intel) platforms

    A weakly reversible Forth virtual machine supporting backtracking and related features, Used to support research into the semantics and programming structures of weakly reversible languages.
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  • 3

    A SpaceLife DNS-Nuke Dev

    Aiming to build the "SpaceLife-OS" and host a member website on it

    ...This understanding is enouth to compel one to learn about computer's and computer programming, through the Bio-Logical Collective-Intellectual-Conscience compound Opensource Community, to thereby build said DNS-nucleus by reference to Linux From Scratch (not started). In this endeavour my personal requirement's include my having a general competence working on a linux OS terminal (done), understanding and being able to implement all elements of Linux System DNS Networking (1/3) of the way there) and finishing researching Open Source-Code software modules and their configuration options and commands etc (maybe halfway done)
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  • 4

    Book-Reviews-In-Mathematica

    Partial Differential Equations, Complex Analysis, Mathematica, Farlow

    Cliff* Notes, Mathematica Evaluatable "Partial Differential Equations for Scientists and Engineers", Farlow "Physics for Scientists and Engineers", Serway "A First Course in Complex Analysis", Beck "PDE", Asmar "PDE, An Introduction", Colton "Elementary Differential Equations", 7th, Rainville "Ordinary Differential Equations", Tenenbaum "Linear Algebra And It's Applications", Lay "Swokowski Calculus", 5th, Swokowski "Chemistry Concepts & Problems, A Self-Teaching Guide", Houk "Openstax Chemistry" "College Algebra and Trigonometry", 2nd, Kaufman * 2nd order cannonicalization SOLVER, cannonical form automatically * nth order PDE to System of n first order PDE matrices generator with ODE Decouple Solving (pde not yet) * radial probability plot for Hydrogen, pde shrodinger's * Planck blackbody, Rutherford essay * fermi free electron essay * Table of Nucleon positions for all Isotope w/Manipulate * p-p separation nucleus plot using the above
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  • 5

    AAfrag

    AAfrag: Interpolation routines for secondary production

    The Interpolation routines AAfrag provide a compilation of results of the QGSJET-II-04m model for the energy spectra of various secondary particles (photons, neutrinos, electrons, positrons, and antiprotons), calculated over a wide energy range and for different reactions: proton-proton, proton-nucleus, nucleus-proton, and nucleus-nucleus collisions. The used version of QGSJET-II-04m has been fine-tuned to recent experimental data from the LHCf, LHCb, and NA61 experiments, in order to improve the description of secondary production at low energies. v202: extended energy range; bugs in the fortran version 201 corrected
    Downloads: 0 This Week
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  • 6

    FUNseq

    Cell segmentation/tracking for determing aggresive cancer phenotypes

    This page shows the cell segmentation/tracking program for FUNseq pipeline. Identifying a sparse subset of cancer cells from a large heterogeneous population, based on aggressive phenotypes (like invasive migration, multipolar divisions, or asymmetric lineage development) is challenging. Also, such aberration identification is critical, as cells exhibiting these characteristics are linearly correlated with poor prognosis. A high-throughput screening microscope has been developed in our...
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  • 7
    A collection of codes that allow a user to store and use data on quantum levels in a system such as an atom, molecule, or nucleus.
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  • 8
    Pascal NUCLEUS (GUI/VM)

    Pascal NUCLEUS (GUI/VM)

    Portable Pascal GUI Library for Atari ST/TT/MSDOS

    NOTE: As of r816, Nucleus source code is licensed under GPLv3. (8th Oct 2017) Nu|cleus [ˈnjuːklɪəs] - The central and most important part of an object, movement, or group, forming the basis for its activity and growth. This is yet another long-term project (YALP?). The aim is to write a portable GUI/OS for Atari ST, Amiga and DOS. The code must be small, fast and support modern GUI features. ie: Embedded component controls.
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  • 9
    MORPHEUS for Fiji

    MORPHEUS for Fiji

    A tool for unbiased and reproducible cell morphometry in Fiji/ImageJ2

    ...Afterwards, the algorithm performs the evaluation of the most relevant cell-shape descriptors over the full set of detected cells. Optionally, also the extraction of nucleus features and a double-scale analysis of orientation can be performed. The whole algorithm is implemented as a one-click procedure, thus minimizing the user intervention and the ensuing biases and errors of human origin. By this way, MORPHEUS is intended to be a useful tool to face the issue of reproducibility in bioimage analysis.
    Downloads: 0 This Week
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  • 10

    LibNucNucGam

    Nuclear collision secondary particle production cross sections.

    This Python library contains the parametrization of the Nucleus-Nucleus pi-meson (including subthreshold pions) and the direct hard photon gamma-ray production cross sections channels for calculating the secondary gamma-ray and electron/positron spectra based on arXiv:1608.03348. Please, if you use this library DO NOT reference to this webpage, instead reference to arXiv:1608.03348, "Parametrization of the nucleus-nucleus gamma-ray production cross sections below 100 GeV/nucleon: Subthreshold pions and Hard photons" by Ervin Kafexhiu COMING SOON...
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  • 11
    Nucleus CMS
    https://github.com/NucleusCMS This project move to GitHub.
    Downloads: 3 This Week
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  • 12
    This is the prototype version of software for robust detecting and segmentation of cell nuclei in 3D fluorescence labeled microscopy images. First release coming soon...
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  • 13
    Simple comic management.
    Downloads: 0 This Week
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  • 14
    This is a research-level program used to track protein translocation in live cell imaging experiments when the nucleus is not specifically marked by either stain or transfected fluorescent proteins.
    Downloads: 0 This Week
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  • 15
    Nuleus is a game inspired by the side-game Sphere Break in Final Fantasy XII.
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  • 16
    Powerfull media interface software. Image thumbnails, video thumbnails and album art. Support for windows network file sharing. Advanced touchscreen orientated interface. Large buttons and very easy navigation. Multiple screen support.
    Downloads: 0 This Week
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  • 17
    Nucleus CMS erlaubt einen oder mehrere Weblogs (Blogs) zu unterhalten. Es ist leicht zu installieren und äußerst flexibel. Hierbei handelt es sich um die deutsche Version des beliebten Nucleus CMS. (benötigt PHP4 und MySQL)
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  • 18
    Coherent Nucleus is a Java classloader implementation which is used to build executable jar files which contain other jar files that need to be included in the application's classpath via the manifest file's Class-Path attribute.
    Downloads: 0 This Week
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  • 19
    A migration script for importing Nucleus authors, categories, items, comments (and optionally trackbacks and blogroll links) into a fresh WordPress install.
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  • 20
    NucleusCMS Edgeware Branch. An experiment with Nucleus CMS (3.23) reduced to an object oriented framework. Uses Orbit42-Base Class. The aim is to remove everything that is not good OO code abd then restabalise. Not designed as an end user product.
    Downloads: 0 This Week
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  • 21
    A collection of plugins developed for NucleusCMS (some may work with Blog:CMS). The aim is to significantly increase the range and reach of NucleusCMS via the plugin system. And to make available plugins only offered as "cut n paste" code.
    Downloads: 0 This Week
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  • 22
    Tools for moving from Blog:CMS to NucleusCMS. All tools are Hacks & may require some PHP skills. Check our documentation for the best answers found todate. If you move to NucleusCMS let us know how it went - we'd love to hear some "war stories".
    Downloads: 0 This Week
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  • 23
    GWEN is an acronymn for the words GlobalWare Enterprise Nucleus. It is intended to be a toolkit and remote management console for Caché database applications.
    Downloads: 0 This Week
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  • 24
    The "Nucleus CMS Plugins" project is an attempt to provide quality plugins for Nucleus (weblog CMS)
    Downloads: 0 This Week
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  • 25
    Nucleus is an Operating system Kernel that is totally different from Linux and Windows. It is easy to understand and implement. It will have native support, small architecture and full VGA support (no text mode).
    Downloads: 3 This Week
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