Search Results for "medical image"
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Showing 179 open source projects for "medical image"
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MedGemma
Collection of Gemma 3 variants that are trained for performance
...The multimodal versions pair a SigLIP-based image encoder pre-trained on diverse de-identified medical imaging data. -
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VoxelMorph
Unsupervised Learning for Image Registration
VoxelMorph is an open-source deep learning framework designed for medical image registration, a process that aligns multiple medical scans into a common spatial coordinate system. Traditional image registration techniques typically rely on optimization procedures that must be executed separately for each pair of images, which can be computationally expensive and slow. VoxelMorph approaches the problem using neural networks that learn to predict deformation fields that transform one image so that it aligns with another. ... -
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ITK-SNAP is a tool for segmenting anatomical structures in medical images. It provides an automatic active contour segmentation pipeline, along with supporting manual segmentation toolbox. ITK-SNAP has a full-featured UI aimed at clinical researchers.
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ImageMagick
ImageMagick 7
...It can be used to create, edit, compose, or convert bitmap images, and supports a wide range of file formats, including JPEG, PNG, GIF, TIFF, and PDF. ImageMagick is widely used in industries such as web development, graphic design, and video editing, as well as in scientific research, medical imaging, and astronomy. Its versatile and customizable nature, along with its robust image processing capabilities, make it a popular choice for a wide range of image-related tasks. ImageMagick includes a command-line interface for executing complex image processing tasks, as well as APIs for integrating its features into software applications. ... -
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C3D is a command-line tool for converting 3D images between common file formats. The tool also includes a growing list of commands for image manipulation, such as thresholding and resampling.
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Albumentations
Fast image augmentation library and an easy-to-use wrapper
Albumentations is a computer vision tool that boosts the performance of deep convolutional neural networks. Albumentations is a Python library for fast and flexible image augmentations. Albumentations efficiently implements a rich variety of image transform operations that are optimized for performance, and does so while providing a concise, yet powerful image augmentation interface for different computer vision tasks, including object classification, segmentation, and detection. Albumentations supports different computer vision tasks such as classification, semantic segmentation, instance segmentation, object detection, and pose estimation. ... -
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MONAI
AI Toolkit for Healthcare Imaging
...It provides domain-optimized foundational capabilities for developing healthcare imaging training workflows in a native PyTorch paradigm. Project MONAI also includes MONAI Label, an intelligent open source image labeling and learning tool that helps researchers and clinicians collaborate, create annotated datasets, and build AI models in a standardized MONAI paradigm. MONAI is an open-source project. It is built on top of PyTorch and is released under the Apache 2.0 license. Aiming to capture best practices of AI development for healthcare researchers, with an immediate focus on medical imaging. ... -
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XMedCon
medical image conversion utility
a medical image conversion utility & library; hereby hoping to lower at least one barrier in medical research projects. -
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SMILI
Scientific Visualisation Made Easy
...See our YouTube channel for tutorial videos via the homepage. The applications are all built out of a uniform user-interface framework that provides a very high level (Qt) interface to powerful image processing and scientific visualisation algorithms from the Insight Toolkit (ITK) and Visualisation Toolkit (VTK). The framework allows one to build stand-alone medical imaging applications quickly and easily. -
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PICSL Greedy Registration Tool
Fast deformable 3D image registration tool
Greedy is a tool for fast medical image registration. It was developed at the Penn Image Computing and Science Lab at the University of Pennsylvania. The motivation for developing greedy was to have a really fast CPU-based deformable image registration tool that could be used in applications where many images have to be registered in parallel - like multi-atlas image segmentation. -
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The MITK Workbench is a free, open-source application for medical image visualization, segmentation, registration, and much more. Beyond the Workbench application, MITK is a comprehensive C++ framework for medical image computing. It provides a modular foundation for extending the MITK Workbench with custom plugins or developing your own medical imaging applications and research prototypes.
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dcm-to-png-converter
DICOM to PNG converter for easy viewing and sharing
This Python-based tool converts medical DICOM (DCM) images into PNG format for easier viewing and sharing. It uses the pydicom library to read DICOM files and Pillow to handle image conversion. The user can select individual DICOM files or an entire folder, and the tool outputs corresponding PNG images. Ideal for medical professionals and developers working with medical imaging data. -
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ExCon Imager
Gigapixel GPU accelerated radio interferometric imager
ExCon can create images with a very wide field of view (more than billion pixels). It implements novel gridding and image weighting algorithms. It is well suited to make ultra deep radio interferometric images, minimizing aliasing artefacts and PSF variation. NVIDIA GPU acceleration is available. JAVA/SCALA support available. -
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CT4AM
Tools for 3D image analysis of additively manufactured parts
...Moreover, data analysis and processing of G-code are key assets of the project. The main objective is not to provide yet another complex application for volume data visualization and medical image processing. Instead, CT4AM is a collection of small and simple apps that have already been successfully used to solve various problems in materials science and process visualization. You can either execute these tools directly or use their source codes to develop your own application for toolpath analysis or correlation. -
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Iris
2-photon scanning software
Iris is a LabVIEW package, developed at the Keller Lab (Basel FMI), for running 2-photon microscopes. It is supplied with auxiliary software for recording additional experimental parameters, such as behavioral states. Iris is freely available. You may modify it as you wish and use it as you wish, so long as you comply with the licence terms (see below). However, please note that we are **unable to offer any guarantee of support**. There are two exceptions to this. 1) If you find a... -
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cerberuscms2
Cerberus Content Management System
Cerberus Content Management System is a dynamic, secure and infinitely expandable CMS designed after a Unix-Like model. It is a custom written Web Application Framework ( W.A.F. ) with a consistent and custom written Pre-Hyper-Text-Post-Processor Programming Code Framework ( P.C.F. ). This Web Application Software Project' aim is to be the fastest and most secure Web Application Framework, Web Application Programming Code Framework, Text, Voice and Video Communications Platform and Content... -
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CerberusCMS5
Cerberus Content Management System
Cerberus Content Management System is a dynamic, secure and infinitely expandable CMS designed after a Unix-Like model. It is a custom written Web Application Framework ( W.A.F. ) with a consistent and custom written Pre-Hyper-Text-Post-Processor Programming Code Framework ( P.C.F. ). This Web Application Software Project' aim is to be the fastest and most secure Web Application Framework, Web Application Programming Code Framework, Text, Voice and Video Communications Platform and Content... -
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Cerberus Content Management System 6
Cerberus Content Management System
Cerberus Content Management System is a dynamic, secure and infinitely expandable CMS designed after a Unix-Like model complete with a Unix-Like Kernel File named: Cerberus. It is a custom written Web Application Framework ( W.A.F. ) with a consistent and custom written Pre-Hyper-Text-Post-Processor Programming Code Framework ( P.C.F. ). This Web Application Software Project' aim is to be the fastest and most secure Web Application Framework, Web Application Programming Code Framework, Text,... -
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MELAGE is a neuroimaging software developed for visualizing and processing medical images, both Ultrasound and Magnetic Resonance Images (MRIs). Specially it has been prepared for neuroimaging of newborns, it is a versatile platform that allows the visualization of many types of medical images. It allows to load two, three and four-dimensional images of both techniques and in the case of 3D images it allows the simultaneous visualization of the three orthogonal planes which facilitates the...
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tdsft
TDSFT (Two-Dimensional Segmentation Fusion Tool)
Given multiple segmentations related to the same tumor, statistical metrics could be exploited to determine the most reliable one, from there identified as ground truth. Numerous algorithms have been developed over time, but to date, there is no validated method for this procedure. Therefore, research is still active in this area. Two-Dimensional Segmentation Fusion Tool (TDSFT) is an open-source tool developed in MATLAB and distributed as a standalone application for MAC, Linux, and... -
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plastimatch
Volumetric image processing software
Plastimatch is an open source software for image computation. Our main focus is high-performance volumetric registration of medical images, such as X-ray computed tomography (CT), magnetic resonance imaging (MRI), and positron emission tomography (PET). -
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ImageJ2x
Java Image Processing Program
ImageJ2x is medical image processing program inspired by NIH Image for the Macintosh. It can display, edit, analyze, process, save and print 8-bit, 16-bit and 32-bit images. There can be many image formats including TIFF, GIF, JPEG, BMP, DICOM, PNG, FITS and "raw" and ... Read and supports "stacks" (stack), a series of images that share a single window. -
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NavImm X "Navigatore immagini"
Visualizzatore immagini
...Possiede numerose opzioni per la gestione e modifica delle immagini. I formati supportati sono: Cursor (cur), Icons (ico), Enhanced MetaFiles (emf) , Windows MetaFiles (wmf), JPEG File, ZSoft PaintBrush, Tagged Image File (tif, tiff, fax, g3n, g3f, xif), (gif) , Medical Image (dicom, dic, dcm), Fractal Image File (fif) , Windows Bitmap, Portable Network Graphics (png), Targa Bitmap, NavImm Graphic (nvg) , File Crittati (nav), Portable Pixmap , pgm , Camera RAW , Photoshop PSD , Vectorial objects (iev) , Layers (lyr, all) , (MPO) . Sistemi operativi supportati : Windows™ x86 / 64bit, MacOs™ Linux™(wine) -
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Amide's a Medical Image Data Examiner: Amide is a tool for viewing, registering, and analyzing anatomical and functional volumetric medical imaging data sets.
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ReViSP
ReViSP, a 3D volume rendering MATLAB tool for multicellular spheroids
Reconstruction and Visualization from a Single Projection (ReViSP) tool: a 3D volume rendering method we developed to reconstruct the 3D shape of multicellular spheroids, besides estimating the volume by counting the voxels (3D pixels) fully included in the 3D surface. ReViSP is written in MATLAB (The MathWorks, Inc., Massachusetts, USA) and the source code is freely provided. Requirements for running ReViSP from the source code: MATLAB 2020a and Image Processing Toolbox 11.1 or later...
