Search Results for "i ching dna"
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Showing 20 open source projects for "i ching dna"
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Our computer monitoring software allows employees, field contractors, and freelancers to manually clock in when they begin working on an assignment. The application will take screenshots randomly or at set intervals, which allows employers to observe the work process. The application only tracks activity when the employee is clocked in. No spying, only transparency.
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Red Hat Enterprise Linux (RHEL) on Microsoft Azure provides a secure, reliable, and flexible foundation for your cloud infrastructure. Red Hat Enterprise Linux on Microsoft Azure is ideal for enterprises seeking to enhance their cloud environment with seamless integration, consistent performance, and comprehensive support.
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Timewave Synthesizer
A binary waveform synthesizer based on Timewave Zero
A binary waveform synthesizer derived from and based upon Timewave Zero theory by Terence McKenna. His theory proposes that the structure of time is a complex wave with a scalar potential, and the King Wen sequence of the I Ching is the 64 hexagram code from which the waveform of time is derived; that the King Wen sequence maps the linear progression of the human states of mind, which ultimately substantiates this waveform. This theory is the basis for the well-known novelty computer program he... -
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methylation_plotter
A dynamic Web tool for easy methylation data visualization
Methylation plotter allows to generate publication-ready, high quality graphics summarizing methylation data in lollipop- and heatmap-like plots. Mallona I, Díez-Villanueva A and Peinado MA (2014) Methylation plotter: a web tool for dynamic visualization of DNA methylation data Source Code for Biology and Medicine 9:11 http://www.scfbm.org/content/9/1/11 IMPORTANT NOTICE Methylation plotter has moved to a new URL http://maplab.cat/methylation_plotter -
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Chinese I Ching R Algorithms
Chinese I Ching Algorithms implemented with R programming
I Ching offers an idea to summary the world by constructing functional mappings in finite groups. Much of ancient Chinese natural and social science grew from its concepts as root. The derived theories like "Eight Diagrams", "Five Elements" became the foundation of nearly all academic fields in acient Chinese. As a result, the theories are also the high concentration of many practical and statistical experience in China during her thousands-of-year history. This project tries to realize... -
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CEMAsuite
Consensus/Degenerate Primer Design Application
CEMAsuite, is an interactive Java-based application with the ability to (i) construct a codon-equivalent multiple alignment (CEMA) from a protein multiple sequence alignment (MSA) file, (ii) generate and score each position in the consensus DNA sequence using multiple algorithms, (iii) design single-degeneracy primer backbones using Primer3 (Untergasser et al. 2012), (iv) estimate the stability of degenerate primers on each of the coding sequences within the CEMA, and (v) export intermediate... -
Email is the backbone of your customer engagement. The Twilio SendGrid Email API is the email service trusted by developers and marketers for time-savings, scalability, and delivery expertise. Our flexible Email API and proprietary Mail Transfer Agent (MTA), intuitive console, powerful features, and email experts make it easy to ensure all your email gets delivered in seconds and without interruption.
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Gecko Hamaker
Calculates Hamaker coefficient,interaction free energy,force,torque.
The Gecko Hamaker open-source software project is a full implementation of the fully retarded Lifshitz formulations for isotropic and anisotropic plane-plane and cylinder-cylinder interactions with intervening interlayer materials, planar systems of up to 99 layers, and graded interfaces for the modeling of grain boundaries or other continuously changing systems, accompanied by a database of material optical properties spectra. The machine-readable optical property database is available... -
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COV2HTML
A visualization and analysis tool of Bacterial NGS data for Biologists
COV2HTML provides an easy and 'in home' web interface for biologists that allows coverage visualization of the NGS alignment needed for the analysis. It combines two essential processes: (i) MAP2COV, a tool that converts the huge NGS mapping or coverage files into light specific coverage files which contains genetic elements informations. (ii) COV2HTML, a visualization interface allowing a real-time analysis of data with selected criteria. Thus this interface offers a visualization of NGS... -
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mitoMaker
mitoMaker - a mitochondria pipeline wrapper script
Mitomaker is a pipeline wrapper, result analyzer and automated annotator, written in Python v2.7, that, with the help of other programs, builds, analyzes, looks for the best build and annotates target genomes (such as mitochondria and cloroplast). It could be used with other targets, such as specific genes, or transcriptomes, even though that is not it's primary goal, nor thoroughly tested. After various attempts to build different mitochondrial genomes in the lab I studied, a general... -
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dnarand
dnarand is a highly customizable DNA sequences writer
dnarand is a random DNA sequences writer. I started writing it for learning the basics of programming and Python language, using it as a gym for the language features that I wanted to learn. It turned out to be a highly customizable DNA sequences writer: it can be used to produce random sequences to be used as reference to test a pattern of choice against the appearance of random patterns, or to look at the features of the open reading frames that spontaneously pop up. Plus, it's possible... -
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KrakenD is a high-performance API Gateway optimized for resource efficiency, capable of managing 70,000 requests per second on a single instance. The stateless architecture allows for straightforward, linear scalability, eliminating the need for complex coordination or database maintenance.
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kitchen_drawer
a set of tools for biological sequence analysis
This project is a collection of (hopefully!) useful tools for DNA sequence analysis -- daily utensils I have created and reach for often in my own work as a computational biologist. -
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BioCalc
Calculates the biorhythms of a person.
It is a small WinForms application created in c# that calculates and displays the biorhythms of a person. It knows to display Primary, Secondary Extra and I-Ching biorhythms. -
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BioControls
A .net user control that displays the biorhythm curves.
It is a highly customizable user control made in c# that displays the biorhythm curves. It can display primary, secondary, extra and i-ching biorhythms. It is also able to display biorhythms for different persons (birthdays) on the same chart with different colors and line styles. -
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Javamony
A Student's Approach to the Phylogenetic Problem
... fundamental problems in phylogenetics. Therefore, for my own educational benefit, all code is original. Of course, there are probably a good deal of mistakes as well. I distribute Javamony, as I did Pysimony, hoping that it will be of educational value to someone else or at least vaguely amusing. Upcoming features will be: - Support for Amino Acid sequences - Support for additional file formats (e.g. Nexus) - Multithreading - Additional scoring methods (e.g. maximum likelihood) -
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Swift Sequence Alignment Program
GPU-based DNA sequence alignment program using Smith-Waterman
Swift is a DNA sequence alignment program that produces gapped alignment using the Smith-Waterman algorithm. It takes in a query file (FASTA format) and a reference file (FASTA format) as input. It outputs the reference name, read name, gapped alignment, alignment score, alignment start and end positions, and alignment length. I gave a talk on Swift in the GPU Technology Conference 2012. The talk can be accessed at http://www.gputechconf.com/gtcnew/on-demand-GTC.php?sessionTopic=58... -
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The old book of changes ("I Ching" in Chinese) was born as a binary oracle (Yin/Yang) and evolved to become a wise sacred book. The I Ching application provides random hexagram generation to consult each of the 64 different I Ching configurations.
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WhyChing is a little diversion for Linux, which gives users hexagram-based readings from the Chinese I Ching, or "Book of Changes."
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Chinese I Ching R Algorithms
Chinese I Ching Algorithms implemented with R programming
I Ching offers an idea to summary the world by constructing functional mappings in finite groups. Much of ancient Chinese natural and social science grew from its concepts as root. The derived theories like "Eight Diagrams", "Five Elements" became the foundation of nearly all academic fields in acient Chinese. As a result, the theories are also the high concentration of many practical and statistical experience in China during her thousands-of-year history. This project tries to realize...
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