Search Results for "bowtie-1.2.0"
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Showing 51 open source projects for "bowtie-1.2.0"
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Define and Deliver Comprehensive Cybersecurity Services. Security threats continue to grow, and your clients are most likely at risk. Small- to medium-sized businesses (SMBs) are targeted by 64% of all cyberattacks, and 62% of them admit lacking in-house expertise to deal with security issues. Now technology solution providers (TSPs) are a prime target. Enter ConnectWise Cybersecurity Management (formerly ConnectWise Fortify) — the advanced cybersecurity solution you need to deliver the managed detection and response protection your clients require. Whether you’re talking to prospects or clients, we provide you with the right insights and data to support your cybersecurity conversation. From client-facing reports to technical guidance, we reduce the noise by guiding you through what’s really needed to demonstrate the value of enhanced strategy.
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BrightGauge, a ConnectWise solution, was started in 2011 to fill a missing need in the small-to-medium IT Services industry: a better way to manage data and provide the value of work to clients. BrightGauge Software allows you to display all of your important business metrics in one place through the use of gauges, dashboards, and client reports. Used by more than 1,800 companies worldwide, BrightGauge integrates with popular business solutions on the market, like ConnectWise, Continuum, Webroot, QuickBooks, Datto, IT Glue, Zendesk, Harvest, Smileback, and so many more. Dig deeper into your data by adding, subtracting, multiplying, and dividing one metric against another. BrightGauge automatically computes these formulas for you. Want to show your prospects how quick you are to respond to tickets? Show off your data with embeddable gauges on public sites.
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Bowtie, an ultrafast, memory-efficient short read aligner for short DNA sequences (reads) from next-gen sequencers. Please cite: Langmead B, et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10:R25.
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AWS for Fluent Bit Docker Image
The source of the amazon/aws-for-fluent-bit container image
... indicates backward-incompatible changes. The AWS for Fluent Bit image was launched in July 2019. Between July and October of 2019 we simply versioned the image based on the version of Fluent Bit that it contained. During this time we released 1.2.0, 1.2.2 and 1.3.2. Each release updates the latest tag and adds a tag for the version of the image. The stable tag is also available which marks a release as the latest stable version. -
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Fluent Bit Amazon Kinesis Firehose
A Fluent Bit output plugin for Amazon Kinesis Data Firehose
A Fluent Bit output plugin for Amazon Kinesis Data Firehose. This plugin will continue to be supported. However, we are pausing development on it and will focus on the high-performance version instead. If the features of the higher performance plugin are sufficient for your use cases, please use it. It can achieve higher throughput and will consume less CPU and memory. This plugin has been tested with Fluent Bit 1.2.0+. It may not work with older Fluent Bit versions. We recommend using... -
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Fluent Bit Plugin Amazon Kinesis Streams
A Fluent Bit output plugin for Kinesis Streams
A Fluent Bit output plugin for Amazon Kinesis Data Streams. A partition key is used to group data by shard within a stream. A Kinesis Data Stream uses the partition key that is associated with each data record to determine which shard a given data record belongs to. For example, if your logs come from Docker containers, you can use container_id as the partition key, and the logs will be grouped and stored on different shards depending upon the id of the container they were generated from.... -
Don’t settle when it comes to managing your clients’ IT infrastructure. Exceed their expectations with ConnectWise RMM, our MSP RMM software that provides proactive tools and NOC services—regardless of device environment. With the number of new vulnerabilities rising each year, smart patching procedures have never been more important. We automatically test and deploy patches when they are viable and restrict patches that are harmful. Get better protection for clients while you spend less time managing endpoints and more time growing your business. It’s tough to locate, afford, and retain quality talent. In fact, 81% of IT leaders say it’s hard to find the recruits they need. Add ConnectWise RMM, NOC services and get the expertise and problem resolution you need to become the advisor your clients demand—without adding headcount.
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mrViewer
Flipbook, Image Viewer and Audio-Video Player
This project is no longer active. It has been replaced by mrv2 at: www.sourceforge.net/p/mrv2 A video player, interactive image viewer, and flipbook for use in VFX, 3D computer graphics and professional illustration. -
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libonvif
Library implementing client ONVIF for Windows and Linux
... compatible device. INSTALL FOR WINDOWS: download libonvif-1.2.0.zip and extract folder. From libonvif\libonvif directory, run build.bat from your Visual Studio command prompt. See the ReadMe.txt file for detailed instructions. The video below shows how to install and link to libonvif. INSTALL FOR LINUX, download libonvif-1.2.0.tar.gz file and follow cmake convention. Detailed installation instructions are included in the README included in the tar.gz file. -
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Linux Studio Plugins Project
Linux Studio Plugins Project
LSP (Linux Studio Plugins) is a collection of open-source plugins currently compatible with LADSPA, LV2 and LinuxVST formats. Standalone plugins for JACK are provided since version 1.0.8. Experimental support of ARMv7 added since version 1.1.4 Experimental support of AArch64 added since version 1.1.9 Decomposition of modules and new UI introduced in 1.2.0 Added CLAP support in 1.2.5 Added VST3 support in 1.2.15 The basic idea is to fill the lack of good and useful plugins under the GNU... -
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APBSmem is a Java-based graphical user interface for Poisson-Boltzmann electrostatics calculations at the membrane. APBS version 1.2.0 or later is required.
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Private File
Container software to encrypt files.
Software contenitore per crittare file. E' possibile creare un albero di cartelle e gestirle a proprio piacimento, i file inseriti nel programma vengono automaticamente crittati e mostrati come in esplora risorse. Tutti i dati crittati vengono gestiti da un file salvato in una posizione decisa dall'utente. E' possibile gestire più archivi, e salvarli su pen-drive o altro supporto removibile. . Container software to encrypt files. It is possible to create a tree of folders and manage them... -
buywith is an immersive livestream shopping platform and creator marketplace, revolutionizing the Social Commerce landscape. Leveraging its patented technology, buywith seamlessly integrates into any commerce website, empowering retailers and brands to connect with their audience and drive sales through influencer-led Live shopping events.
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Have you ever wanted or needed to know how much rent you can afford based on your combined income? Now you will know and avoid future residency application denials based on income. Then once you know your rent affordability index, you can then search on apartment listings. Version 1.2.0 will find affordable cities based on your calculations. Requires a FREE API key from HUD to use the affordable city matching feature. Get your free api key from https://www.huduser.gov/portal/dataset...
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GenSeed-HMM
Progressive assembly tool using DNA, protein or profile HMMs as seeds.
... The first seed is provided by the user, and can be a piece of DNA or protein sequence, or an HMM profile, for increased sensitivity. This program depends on BLAST+ or hmmsearch and a number of third-party support tools (EMBOSS' transeq and splitter, bowtie, 454's sfffile and sffinfo). Which tools will be mandatory depends on the kind of seed and assembler used. Assemblers currently supported include CAP3, Newbler, SOAPdenovo, Velvet, and Abyss. -
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Bowtie
Create a dashboard with python!
Bowtie is a library for writing dashboards in Python. No need to know web frameworks or JavaScript, focus on building functionality in Python. Interactively explore your data in new ways! Deploy and share with others! Bowtie uses Yarn to manage node packages. If you installed Bowtie through conda, Yarn was also installed as a dependency. Yarn can be installed through conda. An early integration with Jupyter has been prototyped. I encourage you to try it out and share feedback. I hope... -
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Lumo
Fast, cross-platform, standalone ClojureScript environment
... compile ClojureScript code as of version 1.2.0. See the introductory blog post. It is still considered experimental, given the relatively new Google Closure Compiler port to JavaScript, but it aims to be at feature parity with the JVM ClojureScript compiler. Enter lumo at the command line to launch the ClojureScript REPL. -
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hppRNA
A Snakemake-based handy parameter-free pipeline for RNA-Seq analysis
... six core-workflows such as (1) Tophat - Cufflink - Cuffdiff; (2) Subread - featureCounts - DESeq2; (3) STAR - RSEM - EBSeq; (4) Bowtie - eXpress - edgeR; (5) kallisto - sleuth; (6) HISAT - StringTie - Ballgown. Please cite the following paper when using this package: Dapeng Wang. hppRNA—a Snakemake-based handy parameter-free pipeline for RNA-Seq analysis of numerous samples. Briefings in Bioinformatics, Volume 19, Issue 4, 20 July 2018, Pages 622–626. -
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Vive Stereo Rendering Toolkit provides drag-and-drop components for developers to create stereoscopic rendering effects in a few minutes. With this toolkit, effects such as mirrors or portal doors can be easily achieved in your VR application. Vive or other SteamVR-compatible HMDs, no need to modify. Vive Focus, add WaveVR from "WaveVR/Prefabs" to the scenes; remember to expand the camera rig. Oculus Rift, add OVRCameraRig from "OVR/Prefabs" to the scenes.
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PPLine
SNP calling, annotation and gene/transcripts expression quantification
PPLine is a Python-based suite aimed to process raw RNA-seq or Exome-seq data. PPLine provides: - read mapping (STAR/Tophat2/bowtie/bowtie2), including novel splice junsctions discovery - gene and transcript expression estimation (HTSeq-count/Cufflinks) - SNP calling with BQSR and indel realignment (samtools/GATK) - variant annotation (Annovar) - novel transcripts discovery (Cufflinks) - predicting proteotypic peptides and creating ref/alt proteins fasta-database - integration... -
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QJackRcd
-- this repository is no more updated, transferred to GITHUB --
QJackRcd is a simple stereo recorder for Jack with few features as silence processing for automatic pause, file splitting, background file post-processing. It can be used with QJackCtl. -- this repository is no more updated, all releases after 1.2.0 are hosted on GITHUB -- -
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Xml2Json Converter
Simple tool for converting large XML-files to JSON or JSON to XML
Simple converter tool with GUI (written on JavaFX) for converting large XML-files to JSON and JSON to XML with indicating progress and uses small amount of memory for converting. Starting from 1.2.0 application supports batch converting files from directory by pattern. Uses Java 1.8+ (http://www.oracle.com/technetwork/java/javase/downloads/jre8-downloads-2133155.html). Distributions for Mac, Linux and Windows already have embedded JRE, so just download appropriate distribution and start... -
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MethyMer
Design of specific primer combinations for bisulfite sequencing
MethyMer is a Python-based tool aimed at selecting specific primers for amplification of complete CpG islands. These regions are difficult in terms of selection appropriate primers because of their low-complexity, polyN-, CG-richness, etc. MethyMer have a flexible scoring system capable of selecting primers in problematic regions (e.g. SpG islands) and includes specificity test (based on bowtie alignment against bisulfite-treated genome). It also incorporates TCGA CpG methylation... -
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LibSC-Reader-Kit
a universal card reader,LibSC RF Card Reader Module,
LibSC RF Card Reader Module Development Kit developed by JavaCardOS Technologies is based on Arduino MFRC522-1.2.0 library source code. It has been further encapsulated and its functions has also been enhanced as well, which makes it much closer to a universal card reader's function. -
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camerubuntu-fog-12.04
Camerubuntu-fog est un système basé sur Ubuntu avec un serveur Fog.
Camerubuntu-fog-12.04 est un système Linux basé sur Ubuntu avec un serveur Fog intégré qui vous permettra de mieux préserver vos PC grâce aux processus de capture et de déploiement. -
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mondrian-art
mondrian code used by the ART reporting tool
Code from the mondrian library (version 3.4.1) for use by the ART reporting tool mondrian - https://sourceforge.net/projects/mondrian/ ART - https://sourceforge.net/projects/art/ -
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Faligner
Faligner: a Local Sequence Alignment Ubuntu Package
A package based on 3 local alignment tools i.e., Bowtie, Bowtie2 and BWA. Package covers single-end, paired-end alignments. Moreover, the package also demonstrates overlap alignment and colorspace alignment features. The package also includes graphical user interface to make it interactive. -
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Protospacer Workbench
CRISPR/Cas9 guide-RNA design
Protospacer Workbench helps to design, analyze, and share CRISPR target-sites for any organism or set of FASTA formatted sequences. Design of guide-RNAs for the CRISPR/Cas genome editing system is intuitively easy, but computationally difficult. The main difficulty arises from the need to identify potential off-targets that may be quite different from the intended target. Current online tools for guide-RNA design provide a user friendly interface to sequence mapping software such as Bowtie... -
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MutAid
MutAid: Sanger and NGS based pipeline for mutation screening.
... mapping, variant calling, variant annotation and co-analyze Sanger and NGS data under a single platform. It is capable of analyzing reads from multiple patients in a single run to create a list of potential disease causing base substitutions as well as deletions and insertions. MutAid has been developed for expert and non-expert users and supports four sequencing platforms (Sanger, Illumina, 454 and Ion Torrent) and five read mappers including BWA,TMAP, Bowtie,Bowtie2 and GSNAP and four variant...