Search Results for "gnu science" - Page 98
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Showing 11016 open source projects for "gnu science"
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A php/mysql application that implements a conference proceedings and papers database and the tools to view and update it. Papers can be linked to more than one proceeding and can have multiple file attachments. Papers can be exported to BibTex or Refer.
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quichem
Utilities for fast input of chemical formulae and equations.
*** New releases of quichem will only be available on GitHub. *** quichem is a utility written in pure Python allowing for fast input and parsing of chemical formulae and equations. Entering data does not require any modifier keys or keystrokes to be pressed. This SourceForge page provided pre-built Windows binaries of quichem-pyside. **To run quichem on Mac OS X or Linux**, or with the wxPython front-end, please download the source from quichem's GitHub page at: github.com/spamalot/quichem. -
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Trad4 is a fully concurrent, thread safe, graph-based programming language that scales linearly on multiple cores. It is initially intended for deployment in the financial industry to model real-time risk.
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A project to develop open and free data exchanging interfaces and user interfaces (data readers, writers, plugins, converters, graphic user interfaces, etc) for open source CAE solvers and pre/postprocessors.
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We have moved to github! Please visit us at https://github.com/ROOTPWA-Maintainers/ROOTPWA. ######################## ROOTPWA is a toolkit for partial-wave analysis of multi-particle final states produced in high-energy particle reactions. It is used to determine hadron spectra from experimental data. NOTE: The code is only accessible through the git repository in the "Code" section of this website. Please refer to the README file on how to get and install ROOTPWA and on how to...
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Open Source Implementations for 3D-Surface Characterisation Algorithms according to ISO 25178 (Geometric Product Specification) in verifiable pseudocode (MATLAB). Implementation of an XML-based file exchange format according to upcoming ISO 25178-72.
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Library for creating and analyzing voxel objects. This project has moved to github. https://github.com/jonhiller/Voxelyze
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FLASH
Merge mates from fragments that are shorter than twice the read length
FLASH, Fast Length Adjustment of SHort reads, is a very accurate fast tool to merge paired-end reads from fragments that are shorter than twice the length of reads. The extended length of reads has a significant positive impact on improvement of genome assemblies. -
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Deem
Analyze time-course data with significance tests, clustering, modeling
Use statistical methods to analyze time-course data (gene expression microarray and RNA-seq data in particular, but not limited to). Apply significance tests to filter out only significant genes or time series. Cluster time series into similar groups. Generate network models, including linear or non-linear models. Variable selection and optimization routines included. Written in Scala and R. The application is a cross-platform desktop app with a simple GUI and is fully functional... -
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Animp is an OpenGL program to display movies of particles in motion where the movies are produced by adding calls to animp library routines to simulation code written in either C++ or Fortran. Animp can also display molecules read from PDB files.
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GNU Rocket is an intuitive new way of controlling missiles. The project has moved to GitHub: http://github.com/rocket/rocket
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Linux modified webcam capture software for astronomy. This project is a fork from the great Qastrocam, written by F. Sicard (http://qastrocam.sourceforge.net/). It adds some features I wrote for myself.
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CIG-P
CIG-P is a simple yet flexible data visualization tool
CIG-P is a higher order visualization tool for AP-MS which generates intuitive circular diagrams for visually appealing final representation of AP-MS data. CIG-P can be used to compare a) different AP-MS datasets of various baits or b) a particular bait under various perturbations (lenticular section CIG-P). The output of CIG-P is a simple and intuitively easy to grasp visualization of a complex dataset. Publication: CIG-P: Cicular Interaction Graph for... -
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Publist - HTML Publication list generator. Automates most of the chores involved in maintaining online academic publication lists and offers many presentation, filtering and sorting options to use in your web page. Can import & export BibTeX.
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vipR is a program to screen for sequence variants (SNPs, deletions) in sequence data generated by high-throughput-sequencing platforms. Information on this and other projects can be found on: http://www.altmann.eu
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QNetMapMigrate
Wrapper for QNetMap library
This is a library that allows applications that does not use Qt to use the QNetMap library (https://sourceforge.net/projects/qnetmap/). Library developed in the T8 LLC (http://t8.ru). Written and supported by Sergey Shumeyko. -
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InfoSim
A Java Framework for Simulating Information Theory Concepts
This is a Java Framework which allows to design and simulate Channels, Cryptography algorithms, Coding algorithms, Noise analysis, Information sources and destinations, etc. It supports both Classical and Quantum Information Theory fields. It also allows to design a new Information Scheme from scratch. It has a big Math library which supports Abstract and Linear Algebra objects e.g Hilbert spaces. -
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ArchC is an open-source architecture description language based on SystemC. Its goal is to provide designers with a tool to evaluate new ideas in processor and ISA design, memory hierarchy, etc. and other aspects of computer architecture research.
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SnowMicroPyn
Python based reader for SnowMicroPen® .pnt measurements
SnowMicroPyn is an opensource reader for SnowMicroPen® files in binary .pnt format. The reader is Python based and published as source code as well as compiled executable for Windows, Linux and Mac. The software is preliminary, thus please report bugs. For further information, please read the Readme.txt in the download section. The SnowMicroPen® (SMP) is developed by the WSL Institute for Snow and Avalanche Research, Davos. The SMP is the first high-resolution snow penetrometer. It is... -
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ASEP
Monte Carlo Simulations of Asymmetric Exclusion Processes
Monte Carlo simulations of various classes of asymmetric exclusion processes (ASEP) with open and periodic boundaries. ASEP is a paradigmatic model of non equilibrium statistical mechanics. It can be utilized to model various non-equilibrium phenomena in Biology such as molecular motor transport and protein synthesis. The code's comments will be gradually expanded upon; if there are mistaken or unclear comments they will be corrected. We cannot give an estimation as to when because... -
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DL-Learner is a tool for learning concepts in Description Logics (DLs) from user-provided examples. Equivalently, it can be used to learn classes in OWL ontologies from selected objects. As of August 2014, the source code management of DL-Learner has moved to Github: https://github.com/AKSW/DL-Learner Please use this for the latest code and issue tracking and the website (http://dl-learner.org) for general information.
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PhaseTank
genome-wide computational identification of phasiRNAs
Phase siRNAs (phasiRNAs) are a class of small RNAs, which triggered by miRNA-targeted cleavage and followed by DCL4-mediated production of small RNAs phased in 21-nt increments. Here, we introduce PhaseTank to systematically characterize 'miRNA → mRNA → tasiRNA → target genes' regulatory casacades in plants. With one command analysis, PhaseTank is an easy-to-use software for users. -
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KOR
multi-kinect system
Bundle of 2 softwares (extractor and merger). Extractor broadcast skeletons and clouds to the merger. Multiple extractors can be set in a local network. The merger holds transformation matrices for each extractor, allowing a efficient skeletons fusion from multiple point of view. The merged skeletons are broadcasted in OSC. This project is based on Melon: https://sourceforge.net/projects/kinect-melon/ [!] > requires OpenNI & NITE 1.5 -
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The Khepera III Toolbox is a collection of scripts, programs and code modules for the Khepera III robot. It allows for easy access to all sensors and actuators of the robot and provides a lot of standard programs.
