Showing 11016 open source projects for "gnu science"

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  • 1

    neuranep

    Neural Network Engineering Platform

    A parallel-programming framework for concurrently running large numbers of small autonomous jobs, or microthreads, across multiple cores in a CPU or CPUs in a cluster. NeuraNEP emulates a distributed processing environment capable of handling millions of microthreads in parallel, for example running neural networks with millions of spiking cells. Microthreads are general processing elements that can also represent non-neural elements, such as cell populations, extracellular space, emulating...
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  • 2
    Open PaperOpt
    Open Source Monte Carlo Simulation platform for particle level simulation of light scattering from generated paper structures
    Downloads: 0 This Week
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  • 3

    Fully Connected Neural Network

    Neural Network with Neurons with Multidimensional Activation Function.

    Fully Connected Neural Network with Neurons with Multidimensional Activation Function.
    Downloads: 0 This Week
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  • 4
    MATLAB XML based database designed for Open PaperOpt and saving data related to paper properties
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    modelenv

    Modelling environment for environmental modelling

    An object-oriented Fortran 2003 programming environment for implementing numerical environmental simulation models, including climate and weather prediction models.
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  • 6
    MPI/C++ code to generate initial conditions for cosmological simulations using multiscale gaussian random fields, based on Edmund Bertschinger's GRAFIC-2 package. Provides a replacement for both grafic1 and grafic2.
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  • 7
    ostis
    OSTIS - Open Semantic Technology for Intelligent Systems. This is an open project focused on mass semantic technology creation used in component-based design of various intelligent systems.
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  • 8

    Planck Level-S

    Sources of the simulations package for the Planck satellite project

    This project contains the sources for the simulation codes used within ESA's Planck mission (http://sci.esa.int/planck/)
    Downloads: 0 This Week
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  • 9
    ACT-CV provides an easy to use interface between visual objects on the computer screen (or another video source) and a cognitive modeling tool.
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  • 10
    VERDI is a flexible, efficient, and modular Java-based visualization software tool that is used to visualize multivariate four dimensional gridded environmental datasets such as those output by air quality models.
    Downloads: 1 This Week
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  • 11
    turing machine simulation

    turing machine simulation

    turing machine simulation with gui

    A turing machine simulation. With infinite tape, and finite states of instructions, finite symbols language. Full operational, complete. Coded with reference to http://en.wikipedia.org/wiki/Turing_machine. Have fun!
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  • 12
    Moved to https://github.com/jmeloranta/xemr
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  • 13

    iMir

    Integrated pipeline for HT miRNA-Seq data analysis

    Processing of smallRNA-Seq data to gather biologically relevant information requires application of multiple statistical and bioinformatics tools from different sources, each focusing on a specific step of the analysis pipeline. The analytical workflow can be challenging for the continuous interventions by the operator, a critical factor when large numbers of datasets need to be analyzed at once. To allow a flexible and comprehensive analysis of smallRNA-Seq data we designed a novel modular...
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  • 14
    sfunctioner is a GUI wizard written in PyQt for creating Matlab Simulink sfunctions quickly and efficiently. It helps creating a fully functional sfunction within a few minutes.
    Downloads: 0 This Week
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  • 15
    IMAGINE

    IMAGINE

    Biological image viewer and processor

    Detection, enumeration, and sizing of biological organisms by image analysis.
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  • 16
    SOAPdenovo2

    SOAPdenovo2

    Large-size genome de-novo assembler

    What's next of SOAPdenovo2: MEGAHIT is the formal successor of SOAPdenovo2 MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph http://www.ncbi.nlm.nih.gov/pubmed/25609793 https://github.com/voutcn/megahit Latest Code on GitHub: https://github.com/aquaskyline/SOAPdenovo2 SOAPdenovo is a novel short-read assembly method that can build a de novo draft assembly for human-sized genomes. The program is specially designed...
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    Downloads: 8 This Week
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  • 17
    ** The OpenStudio Legacy Plug-in has been relaunch as Euclid by Big Ladder Software, please see the new homepage: http://bigladdersoftware.com/projects/euclid/ ** The Legacy OpenStudio SketchUp Plug-in makes it easy to create and edit the building geometry in your EnergyPlus input files. Note that active development has moved to the more comprehensive OpenStudio suite of tools and libraries at https://www.openstudio.net/.
    Downloads: 0 This Week
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  • 18
    SketchEl
    Chemical structure sketching tool, for use with various cheminformatics applications. Convenient to use and moderately sophisticated. Suitable for viewing, creating and editing MDL MOL files.
    Downloads: 1 This Week
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  • 19
    The Thot toolkit repository has moved to http://daormar.github.io/thot/ Thot is a toolkit for statistical machine translation. The new Thot toolkit includes fully automatic and interactive machine translation, incremental training of statistical models, parallel estimation, ...
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  • 20
    gMol

    gMol

    gMol molecular graphics

    We've moved to https://github.com/tjod/gMol/wiki gMol is an interactive visualization system used to display and manipulate 3-dimensional models of scientific data, such as molecular structures and surfaces. It contains both OpenGL and web browser widgets that enable flexible user interfaces.
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  • 21

    PyBrella

    Python script to automate umbrella sampling with AMBER

    PyBrella is a script designed to automate the umbrella sampling process, using the AMBER molecular dynamics package.
    Downloads: 0 This Week
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  • 22

    SNSInstrumentStatus

    Android App to display SNS Instrument Status information

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  • 23
    A Disk Scheduling Simulator tool. With an intuitive GUI interface and command line functionality. Built using both VC and VB. Currently supports SSTF,LOOK,CLOOK,SCAN and CSCAN algorithms. Rotational latency is also optionally supported.
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  • 24
    AUTO is a publicly available software for continuation and bifurcation problems in ordinary differential equations originally written in 1980 and widely used in the dynamical systems community.
    Downloads: 15 This Week
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  • 25
    SysGenSIM
    SysGenSIM is a bioinformatics toolbox to create artificial gene expression datasets by simulating Systems Genetics experiments.
    Downloads: 0 This Week
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