Search Results for "image analysis" - Page 8
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Showing 451 open source projects for "image analysis"
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ImagingAnalysis
Direct tissue-level image quantification package for Mathematica
ImagingAnalysis is a Mathematica package that performs grid-based analysis of time-lapse imaging data saved in a sequence of TIFF files. This package requires Mathematica 7.0. Revised on 14 May 2017: Bugs are fixed and incompatibility issues are resolved. The current version runs on Mathematica 11. -
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BTCore
A Collection of Useful Java/Swing Code
NEWEST FEATURE ---------- Added one line ".zip" extraction to Util class! Added one line ".zip" extraction from URL (web) and one line file download from URL! BTCore is a library that was designed to be used with all of Banotech's software. It includes a tremendous amount of code snippets and classes that have been boiled down to allow ease of use by everyone. BTCore is, and always will be FREE. It has tools that we scrapped together over our last few projects, and that we found... -
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Eye
Process monitoring tool. Inspired from Bluepill and God
Process monitoring tool. Inspired from Bluepill and God. Requires Ruby(MRI) >= 1.9.3-p194. Uses Celluloid and Celluloid::IO. Eye is an image processing and analysis library for quickly analyzing image patterns and features, often used in computer vision tasks. -
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RTToolbox
Library to support quantitative analysis of radiotherapy data
Moved to: http://github.com/MIC-DKFZ/RTTB RTToolbox is a software library, developed at the DKFZ to support quantitative analysis of treatment outcome for radiotherapy. The RTToolbox was designed following object-oriented design principles and was implemented in the language C++. It supports the import of radiotherapy data (e.g. dose distributions and structure sets) from DICOM-RT format and other standard image processing formats by using a bridge to ITK. -
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SmartRoot
Semi-automated root image analysis software
...SmartRoot is an operating system independent freeware based on ImageJ and uses cross-platform standards (XML, SQL, Java) for communication with data analysis softwares. To cite us: Guillaume Lobet, Loïc Pagès and Xavier Draye. A Novel Image Analysis Toolbox Enabling Quantitative Analysis of Root System Architecture. 2011 Plant Physiology, Vol. 157 -
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Marvin is an image processing framework that provides features for image and video frame manipulation, multithreading image processing, image filtering and analysis, unit testing, performance analysis and addition of new features via plug-in.
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MRiLab
A Numerical MRI Simulation Platform
The MRiLab project is moving to GitHub, the latest version can be obtained from https://leoliuf.github.io/MRiLab/ The MRiLab is a numerical MRI simulation package. It has been developed and optimized to simulate MR signal formation, k-space acquisition and MR image reconstruction. MRiLab provides several dedicated toolboxes to analyze RF pulse, design MR sequence, configure multiple transmitting and receiving coils, investigate magnetic field related properties and evaluate real-time... -
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Image processing application focused on mathematical morphology. Unique functionality: filters by reconstruction, multiple structuring element, granulometry, geodetic transformations, hit-and-miss.
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Asynchwave
image analysis template library
A research project, Asynchwave library is C++ code provided in a set of source C++ files. Its purpose is to provide a comprehensive set of classes and functions for 1.1. General purpose extendable image analysis on image segments of arbitrary shape. The organization is similar to STL: there are algorithms, collections, functional objects, iterators and adaptors. This architecture allows productive and flexible programming while keeping the code as fast as possible. 1.2. Gray wavefront functions to extract convex hulls, concavities, dales, ridges, rays, angles, waterfalls, and multitude of their relations. ... -
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Animal is AN IMAging Library written in C. Its simple API supports over 80 image formats, and is intended to make massive use of other image processing libraries. Animal aims at image analysis and recognition. It is mainly the C basis of the SIP toolbox.
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corrupt
This program corrupts a unix stream at a specified error rate
This program intentionally corrupts a unix stream at a specified error rate. It is for systematic analysis on the effects of data corruption. I wrote it to simulate bit-rot in file archives so I could test RAID and archive strategies for data recovery. A few short bash scripts are included so you can instantly enjoy text, image, audio, and video corruption. Just drop in your own data files called test.jpg, test.mp3, and test.mp4 and run the scripts. -
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The 'ImageJ Plugins' project is a source of custom plugins for the Image/J software. Image/J is a public domain image processing and analysis program developed in Java (http://rsb.info.nih.gov/ij/).
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...PollenF is capable of measuring all pollen features such as Polar axis, Equatorial diameter, Colpus length, Colpus width, Porus length, Porus width, Spine length, Spine width, Exine and Intine thickness, P/E and Pollen shape. The software supports .jpg, .jpeg, .png, .bmp, .gif, .tif and .tiff formats. To calibrate the software, a known distance on the image (e.g. a scale bar) is required. Users identify a line in the image of which the length is known before the tracing, and then use the scale option to set a scale. All calculations are then automatically reported in micrometers.
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Zika-RNAseq-Pipeline
An open RNA-Seq data analysis pipeline tutorial
RNA-seq analysis is becoming a standard method for global gene expression profiling. However, open and standard pipelines to perform RNA-seq analysis by non-experts remain challenging due to the large size of the raw data files and the hardware requirements for running the alignment step. Here we introduce a reproducible open source RNA-seq pipeline delivered as an IPython notebook and a Docker image. -
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Gimias
Graphical Interface for Medical Image Analysis and Simulation
GIMIAS is a workflow-oriented environment for solving advanced biomedical image computing and individualized simulation problems, which is extensible through the development of problem-specific plug-ins. In addition, GIMIAS provides an open source framework for efficient development of research and clinical software prototypes integrating contributions from the Physiome community while allowing business-friendly technology transfer and commercial product development. -
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Texinfo Web Publisher
Multi-format web publishing system based on Texinfo
Texinfo Web Publisher is a Makefile based publishing system featuring simultaneous con- tent creation into HTML, non-split HTML, Framed HTML, HTML Zip, XML, DocBook, PDF, DjVu, PostScript, DVI, Plain text, Info and EPUB book formats. All Texinfo Web Publisher output formats are from a single source. Texinfo Web Publisher can be used for website creation has FTP deployment capabilities and supports Cascading Style Sheets (CSS). Texinfo Web Publisher is a low maintenance solution for... -
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pyEBSD-GUI
A free software to post-process EBSD data.
pyEBSD-GUI is a free software to post-process Electron Backscatter Diffraction (EBSD) data, inducing IPF mapping, image quality mapping, phase mapping etc, plotting pole figure, data segmentation, statistic analysis of the misorientation distribution etc. The software is written by python, and it supports both script and graphic user interface (GUI). pyEBSD V1.0 will be released soon. -
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ScreenPeaker
Shows the master peak value info of the default recording device.
Shows the master peak value information of the default recording device in real-time, as the opacity of an image. Requires: .NET Framework 4.5 -
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ds-Bidens
Software for studying bacterial colony features
Software for studying bacterial colony features: Optical forward-scattering systems supported by image analysis methods are increasingly being used for rapid identification of bacterial colonies. The conventional detection and identification of bacterial colonies comprises a variety of methodologies based on biochemical, serological or DNA/RNA characterization. Such methods involve laborious and time-consuming procedures in order to achieve confirmatory results. -
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thinkpad-ec
Infrastructure for examining and patching Thinkpad embedded controller
thinkpad-ec is a community effort to study and patch the embedded controller (EC) firmware used in certain classic Lenovo ThinkPad models. The EC is a tiny microcontroller that governs low-level features such as keyboard scan codes, fan behavior, battery checks, and thermal policies—things the operating system can’t normally change. This project documents the EC’s layout and provides tooling to extract, analyze, and modify EC images so users can apply specific fixes or enhancements. Common... -
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XParallax viu
Software for automated astrometry
XParallax viu is a free software tool for automated astrometric data reduction of astronomic CCD images. It helps astronomers to perform an accurate astrometric reduction of dozens ore even hundreds of images which can be used in subsequent data analysis process. Fit headers generated by this software are fully compatible with other commonly used image utilities like SAO DS9 or Aladin Sky Atlas. -
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KaryoF, Görüntü Analiz Sisteminin PolenF yazılımından sonra ikinci ürünü olarak araştırmacıların kullanımına sunulmuştur. Kolay arayüzü, kullanım dilinin tamamen Türkçe olması, ölçeklendirme ayarları, homolog kromozomların otomatik veya manuel olarak doğru bir şekilde eşlenme özelliği, birden fazla metafaz sonuçlarının tek tuşla birleştirilerek güvenilir sonuçlar elde edilmesi, literatürdeki bütün karyotip simetri-asimetri indekslerinin hesaplanması ve sonuç birleştirme özelliği ile...
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Gamera is a framework for the creation of structured document analysis applications by domain experts. It combines a programming library with GUI tools for the training and interactive development of recognition systems.
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Lute Tablature Toolkit for Gamera
Optical Music Recognition for Tablature Notations
A toolkit for the optical recognition of 16th century lute tablature prints. It is based on and requires the Gamera document image analysis framework (http://gamera.sf.net). -
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libcrn is document image processing library written in C++11 for Linux, Windows, Mac OsX and Google Android. It is a toolbox that allows to create easily software such as OCRs and layout analysis tools.
