Search Results for "fast marching method" - Page 7
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Showing 219 open source projects for "fast marching method"
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hobipb
a higher-order boundary integral Poisson-Boltzmann solver
This software contains the parallel higher-order boundary integral method to solve the linear Poisson-Boltzmann (PB) equation. A well-posed boundary integral formulation is used to ensure the fast convergence of Krylov subspace linear solver such as GMRES. The molecular surfaces are first discretized with flat triangles and then converted to curved riangles with the assistance of normal information at vertices. -
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IHC Profiler
A plugin for the quantitative analysis of Immunohistochemistry samples
Identification and scoring of cancer markers by Immunohistochemistry has been shown to be of value in determining the aggressiveness of specific cancers, as well as in predicting patient outcome for many cancer types. Despite its routine clinical use, a problem with the standard scoring method is the inherent subjectivity and variability of purely visual inspection. To diminish this visual perception biasing, IHC profiler has been developed as a standard automated scoring... -
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Hierachical_DNAcoder
An Hierachical Approach to Multi-Reference Genome compression
The storage and data transferring of large genome data are becoming important concerns for biomedical researchers. We present a novel multi-reference based genome compression method with a hierachical structure. Our approach works for the de facto standard alignment format (i.e., BAM) compression that is the pressing need at present. We align new sequences to a reference sequence using SOAP3, a GPU-based aligning software, and summarize mapping properties and information for exact mapped... -
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This is the former home of pyecm, which has now been moved to github: https://github.com/martingkelly/pyecm Pyecm factors large integers (up to 50 digits) using the Elliptic Curve Method (ECM), a fast factoring algorithm.
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Go from Code to Production URL in SecondsSkip the Kubernetes configs. Cloud Run handles HTTPS, scaling, and infrastructure automatically. Two million requests free per month.
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MySQLTunnel
HTTP tunnel to MySQL written in PHP. Returns JSON descriptive result.
HTTP tunneling is a method for connecting to a MySQL server that uses the same protocol (http://) and the same port (port 80) as a webserver does. MySQLTunnel implements an HTTP tunneling to MySQL in a fast and secure way. Written in PHP can be installed in any webserver or hosting with the LAMP or WAMP stack available, to allow access to internal MySQL server. -
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tuda-rsync_install
install method for cluster compute nodes
Tuda-rsync_install is a initrd image containing scripts to partition and rsync a rootfs to compute, or other nodes. A fast, easy and flexible solution not only for HPC systems, although it has been developed for that purpose. -
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DCTV
DUAL CONSTRAINED TV-BASED REGULARIZATION ON GRAPHS
...We use a flexible graph data representation that allows us to generalize the constraint on the projection variable. We show how this new formulation of the TV problem may be solved by means of fast parallel proximal algorithms. On denoising and deblurring examples, the proposed approach is shown not only to perform better than recent TV-based approaches, but also to perform well on arbitrary graphs instead of regular grids. The proposed method consequently applies to a variety of other inverse problems including image fusion and mesh filtering. -
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Java Fast Method Call Graph Generator
Analysis tool that generates method call graphs
The project's aim is to develop a fast Method Call Graph generator for the Java Programming Language. The search proceedure combines a Finite State Machine and ad hoc parsing to allow for fast access to method definitions and method calls within the source code. -
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JPlex
Java lexical analyzer generator
...JPlex lexers are NIO-based, DFA-powered, push-driven, and fully decoupled and reusable. Their state machines are precompiled and serialized, so run time initialization is fast no matter how large the rule set. JPlex is not a parser generator; it only generates an interface for its parsers, and it does not build a parse tree. When the lexer identifies a token that has a named event associated with it, it passes the token to the parser method associated with that event. A lexer can dispatch token events to any number of parsers. ... -
Train ML Models With SQL You Already KnowBuild and deploy ML models using familiar SQL. Automate data prep with built-in Gemini. Query 1 TB and store 10 GB free monthly.
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WipeOut is secure data deletion method & application. WipeOut method is designed to be fast and secure. WipeOut also has many sub schemes for faster (but not weak) wipe process .
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darks-orm
a simple, convenient, fast, powerful ORM data persistence layer.
Darks is a comprehensive type of lightweight ORM data persistence layer framework, integrated Hibernate "automation" ORM framework for the convenience, stability, as well as the Mybatis ORM framework "semi-automatic" efficient, high concurrency, set two ORM patterns as a whole.The framework to simplify the cumbersome configuration process, using Jython script language extensions, as a dynamic SQL language realization scheme.Construction of a highly efficient multi function domain data... -
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OFR Analysis Tool
For the analysis of output data from the OFR method
The OFR method is a type of steered molecular dynamics method for determining potentials of mean force (PMF) (Phys. Rev. E, 2011, 83: 021114) and local diffusion coefficients, D(z) (Phys. Rev. E, 2012, 86: 036707). OFR-AT is a fast and convenient program for analyzing large output data files from the OFR method, and returns the information necessary to quickly and easily calculate the PMF and D(z) in a spreadsheet. -
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ImageToMySize
ImageToMySize converts to perferred image
The Image Converter to my size is provided in different methods including the interpolation one – created for high quality procedure – and the fast procedure method. File resizing converter features fast image resizing mode providing the opportunity to deal with images as soon as possible. The converter implies preview mode for the result analysis before its resizing.The most widespread formats: (BMP, JPEG, JPEG 2000, GIF, PNG) -
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Fast Solver for Potential and LFFFs
This is a fast solver for global potential field in the Solar Corona
...The solver is based on a combination of the spectral method and the finite-difference scheme. In longitude direction the equation is transformed into Fourier spectral space and the resulted 2D equations in r–θ plane for the Fourier coefficients are solved by finite difference in a direct way. The solver shows a distinguish virtue of extremely fast computing speed, e.g., the computation for a magnetogram with resolution of 180(θ) × 360(φ) is completed by only less than two seconds and even on a very high resolution 600 × 1200, the solution can be obtained within about one minute on a single 2.66G CPU. -
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Log5j is a lightweight and fast java logging library for Java versions 5 and above. It is very similar to log4j in style, but uses Java 5's varargs feature to allow any number of arguments to be passed to any logging method.
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jquery.qrcode.js
qrcode generation standalone (doesn't depend on external services)
...The plugin is designed to be lightweight, with a minified and compressed footprint of less than 4 KB. Its basic usage is simple: include the script, create a container element, and call the QR code method with text or options. Developers can configure dimensions such as width and height when generating a code. It is best suited for older jQuery-based sites, simple web utilities, landing pages, and legacy projects that need fast client-side QR generation. -
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Harmoni Search Engine Application
Harmoni is search engine application written with Python
...Harmoni search engine is not only focused on the searching the files, but also focused on searching any keywords on document files. Harmoni is easy to use application, and it can find any keywords fast. Harmoni has simple interface in “home”. User can search any string on some types of document (*.txt, *.html, *.docx, *.pptx, *.xlsx, *.pdf). There are two kinds of searching method which can be used to search the keyword; fragment word and whole word. Search mode: a. Fragment Word: Harmoni will search any fragments on the target files. ... -
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TinyMT
Fast high quality random number generator.
TinyMT is a very fast random number generator..It produces high quality random numbers that pass the BigCrush and AdaptiveCrush tests. This project is a port of the TinyMT project on GitHub, which is written in C: https://github.com/jj1bdx/TinyMT My updates to this project include: 1. Ported the project over to C++. 2. Ported the project over to C#. 3. -
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phalanx # parallel hash alternative
parallel hash alternative message digest
phalanx - parallel hash alternative (PHA) is an initiative to provide a fast and portable, parallel/multithreaded message digest utility and library. -
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PLEASE NOTE!!! ClipUpload will not be available from SourceForge anymore. RIP, SourceForge. You were once good. Please find our new home of source code on Github: https://github.com/NimbleTools/Clipupload Or on our website: https://nimble.tools/clipupload --- Quickly upload anything thats on your clipboard to the internet. It supports FTP, Imgur.com, Pastebin.com and Dropbox. Usage? Step 1: Copy. Step 2: Right-click system tray icon and pick an upload method. Step 3:...
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BIM-ISO8583.NET
Implementation of ISO8583 Protocol in .NET
BIM-ISO8583.NET is a small .Net library that allows developers to parse and create ISO8583 messages. This library was released to help financial system developers to fully comply with ISO 8583 protocol's standard and make development fast and easy. BIM-ISO8583.NET provides a simplified development technique that enables you to concentrate on the business logic instead of dealing with long method of parsing and building ISO8583 messages. The program method and technique used in this library were developed by Bim Garcia, a Financial Systems Developer. He aims to establish a significant contribution for the enhancement and advancement of the present technology specifically in the financial industry. -
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LibAran is a 2D/3D Fast Multipole Method software library. Distributed under the GNU LGPL, it provides a C API to allow developers to use such algorithms in their own applications.
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imgs
imgs is a http server(image server)
imgs is a http server(image server). very small and fast. imgs是一个http服务器。 非常轻量，非常快速。 imgs Mainly used for http static html,js,css,images... 主要用于提供http静态页面，类似html,js,css,图片等 It very fast, because all of the files are stored in memory by hash table. imgs非常快速，因为所有文件都存放在内存hash表里面。 It Only supports http GET method. 目前只支持http GET请求。 -
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phpBB Multiple Domain SSO
phpbb Multiple domain Single Sign on with wordpress plugin
...You have to have a page that loads up all the cookie setting codes from remote domains. However the loading up of authentication page, the remote authenticator pages in their iframes, and the redirection is VERY fast, taking only 1 seconds or 1.5 seconds. just like how you see in facebook etc - or any other site that uses this method. All files contain extensive comments, and also include configuration variables to change. -
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FFP (Feature frequency profile) is an alignment free comparison tool for phylogenetic analysis and text comparison. It can be applied to nucleotide sequences, complete genomes, proteomes and even used for text comparison.
