Search Results for "gnu science" - Page 53
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Showing 11014 open source projects for "gnu science"
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MEMBPLUGIN
MEMBPLUGIN: studying membrane complexity in VMD
MEMBPLUGIN is a membrane analysis tool for molecular-dynamics simulations. It is a collection of visual and command-line tools that can be run within the Visual Molecular Dynamics (VMD) environment to analyze biomolecular simulations of lipid bilayers. -
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BioPPSy
A biochemical property prediction system
Computationally predicts the pharmacokinetic properties of drug candidates using Quantitative Structure Property Relationships (QSPR) modelling. Assembles a set of tools and databases for predicting the physical properties of small molecules. The program models a given property's dependence on a collection of molecular and structural descriptors using a training set of molecules. Neural networks and support vector regression are available, as well as linear models. The models generated by... -
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WIP – Wzzard Integration Platform – relying on fog computing paradigm offers the possibility to integrate the IOT and IT world in Enterprise enviroment. Advantech B+B Wzzard is a wireless connectivity hardware platform for sensors of different nature. It's easy to implement and scalable and it's being realized with industrial standard so it offers high availability and can be used in remote and hostile environments. The WIP is a Web Project developed by IT Distribuizione that adds...
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UmUTracker
A MATLAB program for 2D particle tracking or 3D DHM based tracking.
We present a versatile and fast MATLAB program (UmUTracker) that automatically detects and tracks particles by analyzing long video sequences acquired by either light microscopy or digital holography microscopy (DHM). Our program finds the 2D particle center position using an isosceles triangle transform and the axial position by a fast implementation of Rayleigh-Sommerfeld numerical reconstruction algorithm using a one dimensional radial intensity profile. *Updates v1.1: 2017/11/21- Bug... -
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FormScanner
FormScanner - Free OMR Software
FormScanner is an OMR (Optical Mark Recognition) software that automatically marks multiple-choice papers. FormScanner not bind you to use a default template of the form, but gives you the ability to use a custom template created from a simple scan of a blank form. The modules can be scanned as images with a simple scanner and processed with FormScanner software. All the collected information can be easily exported to a spreadsheet. -
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DicomReader is a simple Java Dicom files decipher. It handles headers and images within as well; data (headers and pixel-value images) will be saved into ascii clear text files. A pgm version of the image files is also provided.
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Open-source Python software library and GUI desktop environment for direct bioinformatic analysis of mass-spectrometry data through powerful scripting tools and interfaces to many machine data formats, database search engines, and peptide data formats. For a copy of the source code, check out our Github repositories: mzDesktop: https://github.com/MaxAlex/mzDesktop multiplierz: https://github.com/MaxAlex/multiplierz
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Circonium
C# custom control for round gauge creating and tuning.
Demo shows the possibilities of managing custom control project https://circonium.sourceforge.io Control provides tools for creating circular scales with marking on segments and automatic recalculation of the input value into the rotation angle of the arrow. Control contains GDI graphics and does not use OpenGL, or other 3D libraries. How to generate settings for Circonium Control and how apply it on start you Winform Application using that control - look at next... -
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ImatiSTL
Fix STL files for 3D printing
ImatiSTL is a C++ library for applications that need to finely post-process raw polygon meshes represented by STL files. It is particularly useful in 3D printing scenarios: the repairing functions provided by ImatiSTL bridge the gap between printable meshes and real-world meshes with diverse potential defects and flaws (e.g. degenerate triangles, self-intersections, surface holes, ...). ImatiSTL provides both functions for local mesh repairing and methods for global remeshing. Local... -
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PLC-EMU is a Programmable Logic Controller EMUlator for automation applications on linux with digital/analog IO cards, with C functions, Ladder Diagrams,or IEC61131-compliant Instruction List/Structured Text. It is a cheap and open alternative to PLCs.
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OpenGIA
General Intelligence Algorithm
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SODE
Program to solve differential equations using long Taylor series
Program to generate a program to numerically solve either a single ordinary differential equation or a system of them.It is a Ruby program, now called omnisode, which generates either Ruby, C, C++, Maple or Maxima code. Code can be generated for all languages under Linux. Ruby can be generated under Windows. All can be generated under cygwin, but would need work on execution of Maple. Omnisode itself is Ruby, which is needed in all cases to generate the program. -
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Video processing source code for algorithms and tools used in software media pipelines. The currently available source code is written in C++ with their associated libraries and DirectShow Filters. Filters include an H.264 encoder, H.264 decoder, H.264 source filter, RTSP sink and source filters, YUV source, RGB to YUV color conversion, croppers, scalers, video mixing/picture in picture filters, rotate filter, virtual mic, and many more. Code is released under BSD license with exception of...
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TikZiT
pgf/TikZ diagram editor
TikZiT HAS MOVED! TikZiT is now being hosted at GitHub. The versions here are out of date. See the website link below to download the latest version. -
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CognitionMaster
object-based image analysis framework
Wienert S, Heim D, Kotani M, Lindequist B, Stenzinger A, Ishii M, Hufnagl P, Beil M, Dietel M, Denkert C, Klauschen F. CognitionMaster: an object-based image analysis framework. Diagn Pathol 2013, 8:34 -
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MandelbrotExplorer
A program to calculate and represent the Mandelbrot set
This project is a C++ program to calculate and represent graphically the Mandelbrot fractal set, and/or the corresponding Julia sets, according to the seed Z0 given by the user as input. The user disposes of a graphical interface to control the program and modify conveniently some parameters, like the XY-scales, the XY map area, the Julia seed for the complex series iteration of Z(n+1)=Z(n)^2+a, being Z(0)=(X0,Y0) the seed, and "a in XY" the points to be calculated. The user can... -
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PanOCT
Pan-genome Ortholog Clustering Tool
PanOCT, Pan-genome Ortholog Clustering Tool, is a program written in PERL for pan-genomic analysis of closely related prokaryotic species or strains. Unlike traditional graph-based ortholog detection programs, it uses micro synteny or conserved gene neighborhood (CGN) in addition to homology to accurately place proteins into orthologous clusters. -
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IDP
Declarative knowledge representation and reasoning
This is the old release page of the IDP system, please visit http://dtai.cs.kuleuven.be/software/idp/try for the most recent release. -
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OPTOSS NG-NetMS
OPTOSS Next Gen Network Management System (NG-NetMS)
Why to pay tens of thousands $$$ for your network management software? Get visibility into your networks and complex processes inside with NG-NetMS now! NG-NetMS is a new end-to-end network management platform for your Linux servers, Cisco, Juniper, HP and Extreme routers, switches and firewalls. NG-NetMS is precise, quick and efficient. It collects most complete information about the network inventory, topology, map of IPv4 addresses quickly and with minimum hassle. Most... -
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SBML2LaTeX
A documentation and report generator for systems biological models
SBML2LATEX is a tool to convert files in the System Biology Markup Language SBML) format into LATEX files. A convenient online version is available, which allows the user to directly generate report from SBML in form of PDF or TeX, which can be further processed to various file types including DVI, PS, EPS, GIF, JPG, or PNG. SBML2LATEX can also be downloaded and used locally in batch mode or interactively with its Graphical User Interface or several command line options. The purpose of... -
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Vuze - Azureus
An extremely powerful and configurable BitTorrent client
Vuze (formerly Azureus) is an extremely powerful and configurable BitTorrent client. Search and download torrent files. Play, convert and transcode videos and music for playing on many devices such as PSP, TiVo, XBox, PS3, iTunes (iPhone, iPod, Apple TV). -
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BWA is a program for aligning sequencing reads against a large reference genome (e.g. human genome). It has two major components, one for read shorter than 150bp and the other for longer reads.
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RNAfdl
RNA force directed layout
RNAfdl is a highly flexible tool for drawing RNA secondary structures. Secondary structures can be visualized as classical secondary structure plot, circle plot, linear plot or mountain plot. RNAfdl allows manual editing and several drawing styles, as well as a fully automated conjugate gradients minimization approach to draw more complex structures without user interaction. In addition, RNAfdl allows you to incorporate non-canonical base pairs into drawings.
