Search Results for "openmp" - Page 3
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Showing 90 open source projects for "openmp"
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Hrothgar Parallel LM/MCMC Minimizer
A versatile MCMC and downhill optimization engine
Hrothgar is a parallel minimizer and Markov Chain Monte Carlo generator by Andisheh Mahdavi of San Francisco State University. It has been used to solve optimization problems in astrophysics (galaxy cluster mass profiles) as well as in experimental particle physics (hadronic tau decays). It is probably adaptable enough to be applied to your merit function if you can write it in C. -
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Complex Renderer
Simple renderer of complex functions including recursive
.... It is extremely fast, but uses only 32-bit float. And finally, the fourth works on CPU, but uses arbitrary precision (OpenMP), so it hasn't limit for depth (except rendering time). -
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XNDiff
X-ray and Neutron powder pattern simulation analysis
Keywords (XNDiff): -SAXS -SANS -absolute units -core (double)shell crystalline nanoparticles -with a parallelepidal shape -particle assemblies -powder and ensemble average -C/C++ -Unix -OpenMP -HPC Cluster Keywords (BatchMultiFit): -simultaneous fits for several SAXS and SANS curves with simulation data from XNDiff -SANS data can be smeared with dq values from experimental data sets or analytical functions -Mathematica console -local and global optimizers (simulated annealing, differential... -
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Distributed Multithread Apriori (DMTA)
A parallel implementation using MPI and OpenMP to Apriori algorithm
DMTA (Distributed Multithreaded Apriori) is a parallel implementation of Apriori algorithm, which exploits the parallelism at the level of threads and processes, seeking to perform load balancing among the cores. Was implemented in C++ language, using the parallelization libraries OpenMP and MPI. The algorithm was generated as a result of a project developed by André Camilo Bolina, under the guidance of teachers Marluce Rodrigues Pereira, Ahmed Ali Abdalla Esmin and Denilson Alves Pereira... -
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Parallel GENSENG is a parallel implementation of the GENSENG software for detecting copy number variations from high-throughput sequencing data. This software runs exactly as the original code does, except that it utilizes multiple threads where possible. OpenMP was used for multi-threading so changes to the original code were minimal. For a demo, please download the sample data linked to below and follow the README from the tarball. Example read count data: http://www.cs.unc.edu/~wangwb09...
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MinGW-builds
Dual-target(32 & 64-bit) MinGW-W64 compilers for 32 and 64-bit windows
Projects joined MinGW-W64, and the new builds will be available on the MinGW-W64(https://sourceforge.net/projects/mingw-w64) site. -
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AMICA
Adaptive Mixture Independent Component Analysis with Shared Components
Multiple mixture ICA, where model means and independent components are learned. It is possible to reject data and share component between models to increase efficiency. Matlab and independent gui (using Qt) nterfaces available. Uses MPI and OpenMP for inter-node and intra-node parallelization. -
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SphereSim
Physical simulation of particle movements
...++ and the Qt, OpenGL and OpenMP libraries. -
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xphire
Cross-company Parallel Half-Identical Region Engine
XPHIRE (Cross-company Parallel Half-Identical Region Engine) can detect Half-Identical Regions of DNA in CSV-data. -
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makedoku
Command line sudoku generator and solver. It uses opencl or openmp.
Command line sudoku generator and solver. It uses opencl or openmp to solve and generate grids. Each generated grid has an unique solution and the number of givens can be specified as parameter. -
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* Model-checking/simulation-checking library for real-time system with dense-time models in C with CRD (Clock-Restriction Diagrams) technology. * Parametric analysis library for linear-hybrid systems in C with HRD (Hybrid-Restriction Diagram) technol
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fit2dcorr
SAXS 2D > 1D data reduction software, wrapper for Fit2D
The project's repository has moved to github. Please use the repository at https://github.com/Niels-Bohr-Institute-XNS-StructBiophys/fit2dcorr for the new updated versions. The old version is kept at sourceforge. Keywords: fit2d SAXS azimuthal averaging batch processing absolute units (exposure time, transmission, sample thickness) error bars C++ Unix OpenMP -
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RALIB
Randomized Algorithms Library
RALIB provides a library of general-purpose numerical algorithms for analyzing large, high dimensional, multimodal datasets. It currently includes a) the Randomized Singular Value Decomposition, b) the Randomized Approximate Nearest Neighbors, c) the Multiscale Singular Value Decomposition, d) the Heat Kernel Coordinates, and e) the Heat Kernel Function Estimation algorithms. The algorithms are implemented as Fortran95 modules with OpenMP to utilize multiple cores/CPUs. It requires the BLAS... -
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parallel_pmap
parallelized pmap
A parallellized (MPI/OpenMP) version of the pmap utility from player/stage project. With manual correction in coarse phase. -
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parafly
Parallel command processing using OpenMP
Given a file containing a list of unix commands, multithreading is used to process the commands in parallel on a single server. Success/failure is captured, and failed commands are retained and reported. -
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The SNOMP Library
SNOMP (SNOMP is Not OpenMP) is a library for semi-shared memory parall
SNOMP (SNOMP is Not OpenMP) is a library for semi-shared memory parallelization. -
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knowceans
Utility classes from maps to search engine to random samplers
Collection of several multi-purpose Java libraries. --- knowceans-tools = collection of Java utility classes. --- Highlights: --- org.knowceans.util: IndexQuickSort, TableList: apply order of one array/list to others +++ Vectors, ArrayUtils: array convenience +++ RandomSamplers, CokusRandom, ArmSampler, Densities: random sampling and distributions +++ Arguments: command line parser +++ StopWatch, Which, ExternalProcess: runtime stuff +++ ParallelFor: OpenMP workalike +++ PatternString... -
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Simple parallel implementation of a ray-tracing algorythm. (Made for my diploma for bachelor degree). Supports: wavefront .obj format (for models). Custom-made scene xml format. Scene data represented by Tree format. Uses MPI / OpenMP.
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Please use the MOHID code official site http://mohid.codeplex.com/, Thank you, The MOHID team
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OpenMPagrep and CUDAagrep are respectively OpenMP and CUDA implementation of agrep algorithm for approximate DNA string matching. Both OpenMPagrep and CUDAagrep are free of charge and open source. Users can modify the source at their own risk.
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Lightweight prime number generation library. Makes use of OpenMP and aims for performance. Suitable for applications in cryptography or just for educational demonstration.
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This is general purpose library writen on C language with using OpenMP. It's contain different functions, but mostly functions for string processing, math calculations and functions for matrix calculations.
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A Free Distributed Photon Mapping. It´s developed for a University project. Use MPI for distributed processing and OpenMP for internal parralelism.
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this program solves inverse problem of chemical kinetics on gpu and cpu,using ati stream,mpi and openmp