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Scripts to...
(1) format expression data from TCGA (Cancer Genome Atlas) for Cluster 3.0 & Java TreeView (heat mapping).
(2) generate list of potential miRNA clinical biomarkers/signatures based on survival analysis (kaplan-meier curve) statistics.
GeoMondrian is a "spatially-enabled" version of Mondrian. GeoMondrian brings to the Mondrian OLAP server what PostGIS brings to the PostgreSQL DBMS, i.e. a consistent and powerful support for geospatial data. It also provides geo-extensions to MDX.
Lettuce allows Java programmers writing direct SQL queries in Java codes. It defines SQL keywords in Java classes, and it also introduces a way easily combining these keywords to create a versatile query in Java.
We developed a RNA-Seq Data Annotation Pipeline named RNADAP, which measure genes expression in isoform level, work with high speed and less memory usage. Besides, our pipeline can be compatible with results from different mapping software.
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given three point that are not co-linear in the object or image space return a rotation matrix and offset that allows image points to be projected back into object space.
The csvdatamix project aims to randomize CSV input data files in order to conceal the original state of the data. Similar to data masking or data transformation. Also has mapping abilities to translate back to the original state of the data.
A powerful 100% JAVA flat file processing ORM framework. Giving the ability to abstract the processing of flat files from business logic, using Hibernate style mapping constructs. Supports fixed length and delimited (e.g CSV) file formats.
Deploy in 115+ regions with the modern database for every enterprise.
MongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
Nail is a GIS tool for displaying and querying spatial data through a web interface. Point, line and polygon vector data can be loaded from shapefiles and displayed on the map. Labels and attributes can also be displayed.
Pace & Place is an application for managing and visualizing GPS data and sports training data. It empowers the user to track training events and combine them with geographic data. Map, waypoint, track visualizations and geo-referencing of photos.
Spreadsheet-to-RDF wrapper capable of transforming spreadsheets to arbitrary RDF graphs; supports mapping language with powerful formula expressions as you know from Excel, local/remote Excel/ODF/CSV, SPARQL service - source available at https://github.com/theandyl/xlwrap
As of December 2011 this is NOT 64 bit. It is still the 32 bit version. Plans failed to develop. Vector Raster Geographic Information Synthesis for 64 bit computers using dual or large screens. Incorporates : Vector processing, Raster Image processing, Digital Elevation Model (DEM) processing. These data can be combined to be viewed in 3D.
Tentacles is a Object-Relational Mapping (ORM) written in Python. It's main concept is to manipulate stored datas as you do for python data structures.
Vector Raster Geographic Information Synthesis. Incorporates Vector: Vector processing, Image processing, Digital Elevation Model DEM processing. These data can be combined to be viewed in 3D. Multitude of system organization aids.
C# rich client, displaying the data of a free towns database in a Google Earth component, a Tree Table visualization component and showing Bing image results of these data.
The geoFarejador is a system for visualization of geo-referenced information. It allows the register of geo-referenced points or polygons. For each geo-referenced item, a number of configurable informations can be associated to it.
This program gets data from a GPS, parses it, and calculate things such as acceleration and distance traveled. That is then saved it to a CSV file. Also shows data in real time and has a speedometer to show your speed in real time (in KM/h or MPH).
CloudBurst is a parallel read-mapping algorithm optimized for mapping next-generation sequence data to the human genome and other reference genomes, for use in a variety of biological analyses including SNP discovery, genotyping, and personal genomics.